Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
EG0002G05310
(Eucalyptus grandis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Eucalyptus grandis | Orthologous gene family | EG0002G05310 EG0002G25790 | 2 |  |
| Tree-based ortholog | EG0002G05310 | 1 | ||
| Anchor point | EG0002G25790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | EG0002G05310 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00001G02190 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00001G02190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00047G01910 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL2G17480 | 1 | |
| Tree-based ortholog | 1-to-many | AL3G01260 AL6G15450 | 2 | ||
| Anchor point | 1-to-many | AL2G17480 AL3G01260 AL6G15450 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G17480 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G26355 AT1G69230 | 2 | |
| Tree-based ortholog | 1-to-many | AT3G02180 AT5G15600 | 2 | ||
| Anchor point | 1-to-many | AT1G26355 AT1G69230 AT5G15600 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G26355 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV6G14150 | 1 | |
| Tree-based ortholog | 1-to-1 | BV6G14150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G07040 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR02G19690 | 1 | |
| Tree-based ortholog | 1-to-many | BR03G28820 BR02G07540 BR10G19510 | 3 | ||
| Anchor point | 1-to-many | BR06G34400 BR10G19510 BR02G07540 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G19690 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-1 | CRU_002G14860 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_003G01230 CRU_006G13430 | 2 | ||
| Anchor point | 1-to-many | CRU_005G02610 CRU_003G01230 CRU_006G13430 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G14860 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00001G01370 | 1 | |
| Tree-based ortholog | 1-to-many | CP00014G01970 CP00094G00690 | 2 | ||
| Anchor point | 1-to-many | CP00014G01970 CP00094G00690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00094G00690 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR09G06660 | 1 | |
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL08G10170 | 1 | |
| Tree-based ortholog | 1-to-1 | CL11G14060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G10170 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00019G01950 | 1 | |
| Tree-based ortholog | 1-to-many | CS11621G00010 CS00030G00920 | 2 | ||
| Anchor point | 1-to-many | CS00030G00920 CS00019G01950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS11621G00010 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00014G07900 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00014G07900 | 1 | ||
| Anchor point | 1-to-1 | CM00014G07900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G07900 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV0G03930 | 1 | |
| Tree-based ortholog | 1-to-1 | FV5G11890 | 1 | ||
| Anchor point | 1-to-many | FV0G03930 FV5G11890 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G42290 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM13G06390 GM19G03961 | 2 | |
| Anchor point | 1-to-many | GM02G13180 GM13G06390 GM19G03961 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM19G03961 GM13G06390 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR13G09490 | 1 | |
| Tree-based ortholog | 1-to-many | GR01G07640 GR03G10200 | 2 | ||
| Anchor point | 1-to-many | GR03G10200 GR01G07640 GR13G09490 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G10200 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD14G020230 MD00G366770 MD06G016780 | 3 | |
| Anchor point | 1-to-many | MD06G016780 MD14G020230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G004940 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00109G00330 ME04489G00130 | 2 | |
| Tree-based ortholog | 1-to-many | ME04043G01980 ME06609G00060 ME06656G00990 ... | 4 | ||
| Anchor point | 1-to-many | ME06656G00990 ME08359G01530 ME04043G01980 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06609G00060 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT6G015390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G024310 MT6G015390 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G30430 OS12G31780 | 2 | |
| Tree-based ortholog | 1-to-1 | OS11G41150 | 1 | ||
| Anchor point | 1-to-many | OS12G31780 OS03G30430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G31780 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00124G00080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00109G00820 PP00033G01900 PP00033G01930 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT08G09700 PT10G15760 | 2 | |
| Tree-based ortholog | 1-to-many | PT17G09520 PT17G09700 PT15G05910 | 3 | ||
| Anchor point | 1-to-many | PT10G15760 PT17G09520 PT15G05910 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G15760 PT08G09700 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G30030 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_003G23140 PPE_005G21020 | 2 | ||
| Anchor point | 1-to-many | PPE_005G21020 PPE_003G23140 PPE_001G30030 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G23140 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30174G04880 | 1 | |
| Tree-based ortholog | 1-to-many | RC27623G00040 RC30138G01240 | 2 | ||
| Anchor point | 1-to-many | RC30138G01240 RC30174G04880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27623G00040 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL05G012160 | 1 | |
| Tree-based ortholog | 1-to-1 | SL03G114970 | 1 | ||
| Anchor point | 1-to-many | SL03G114970 SL05G012160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G012160 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST05G005860 | 1 | |
| Tree-based ortholog | 1-to-1 | ST03G028500 | 1 | ||
| Anchor point | 1-to-many | ST03G028500 ST05G005860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G005860 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G22340 TP5G24280 | 2 | |
| Tree-based ortholog | 1-to-many | TP3G01260 TP6G28500 | 2 | ||
| Anchor point | 1-to-many | TP3G01260 TP5G24280 TP6G28500 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G24280 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G32830 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0003G10760 | 1 | ||
| Anchor point | 1-to-many | TC0003G10760 TC0002G32830 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G10230 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV01G00170 VV01G10560 | 2 | |
| Tree-based ortholog | 1-to-1 | VV17G04670 | 1 | ||
| Anchor point | 1-to-many | VV01G10560 VV17G04670 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G00170 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM09G19590 ZM10G04140 | 2 | |
| Tree-based ortholog | 1-to-1 | ZM04G01810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G01810 | 1 |