Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CS01068G00020
(Citrus sinensis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrus sinensis | Orthologous gene family | CS00364G00020 CS01068G00020 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | CS00364G00020 CS01068G00020 | 2 | ||
| Tree-based ortholog | CS00364G00020 CS01068G00020 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00066G02670 ATR_00066G02660 | 2 | |
| Tree-based ortholog | many-to-many | ATR_00066G02670 ATR_00066G02660 | 2 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL5G24480 | 1 | |
| Tree-based ortholog | many-to-1 | AL5G24480 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G54420 | 1 | |
| Tree-based ortholog | many-to-1 | AT3G54420 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV8G07650 | 1 | |
| Tree-based ortholog | many-to-many | BV3G08390 BV8G07690 BV8G07660 ... | 7 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR09G35390 | 1 | |
| Tree-based ortholog | many-to-1 | BR09G35390 | 1 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_005G19770 | 1 | |
| Tree-based ortholog | many-to-1 | CRU_005G19770 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00009G03360 | 1 | |
| Tree-based ortholog | many-to-1 | CP00009G03360 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL03G06350 | 1 | |
| Tree-based ortholog | many-to-1 | CL03G06350 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00001G08870 | 1 | |
| Tree-based ortholog | many-to-1 | CM00001G08870 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0001G00170 EG0001G00160 | 2 | |
| Tree-based ortholog | many-to-many | EG0011G17880 EG0001G00160 EG0001G00170 ... | 14 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-many | FV2G33060 FV0G44510 | 2 | |
| Tree-based ortholog | many-to-many | FV2G33060 FV0G44510 | 2 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM11G13270 | 1 | |
| Tree-based ortholog | many-to-many | GM13G42210 GM11G13270 GM12G05310 | 3 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR06G23030 GR06G23040 | 2 | |
| Tree-based ortholog | many-to-many | GR06G23070 GR11G13750 GR06G23040 ... | 5 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G046070 | 1 | |
| Tree-based ortholog | many-to-1 | LJ3G046070 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD04G000960 | 1 | |
| Tree-based ortholog | many-to-many | MD00G275640 MD00G275680 MD00G169240 ... | 4 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME07885G00050 | 1 | |
| Tree-based ortholog | many-to-many | ME05280G00020 ME05280G00010 ME10045G00430 | 3 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT2G099470 | 1 | |
| Tree-based ortholog | many-to-many | MT2G099450 MT2G099470 MT2G099465 | 3 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS04G41680 OS04G41620 | 2 | |
| Tree-based ortholog | many-to-many | OS02G39330 OS04G41620 OS04G41680 | 3 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00184G00720 | 1 | |
| Tree-based ortholog | many-to-many | PP00287G00340 PP00055G00100 PP00184G00720 | 3 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT19G09380 | 1 | |
| Tree-based ortholog | many-to-many | PT19G09370 PT13G12500 | 2 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PPE_001G21040 PPE_001G20980 | 2 | |
| Tree-based ortholog | many-to-many | PPE_004G23850 PPE_004G23870 PPE_001G21040 ... | 5 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC27753G00010 | 1 | |
| Tree-based ortholog | many-to-1 | RC27753G00010 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL04G072000 | 1 | |
| Tree-based ortholog | many-to-many | SL06G053380 SL04G072000 | 2 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST04G026440 | 1 | |
| Tree-based ortholog | many-to-many | ST06G017590 ST04G026440 | 2 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G08000 | 1 | |
| Tree-based ortholog | many-to-1 | TP5G08000 | 1 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0004G17430 | 1 | |
| Tree-based ortholog | many-to-many | TC0004G17410 TC0004G17420 TC0004G17430 | 3 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV05G12990 | 1 | |
| Tree-based ortholog | many-to-many | VV05G12990 VV05G13010 VV05G13060 ... | 9 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM02G11330 ZM02G11320 | 2 | |
| Tree-based ortholog | many-to-many | ZM05G33200 ZM08G07900 ZM10G19420 ... | 7 |