Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CS00235G00100
(Citrus sinensis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrus sinensis | Orthologous gene family | CS00235G00100 | 1 |  |
| Tree-based ortholog | CS00235G00100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CS00235G00100 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00021G01800 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00021G01800 | 1 | ||
| Anchor point | N/A | ATR_00021G01800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00021G01800 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL7G13310 | 1 | |
| Tree-based ortholog | 1-to-1 | AL7G13310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G13310 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT4G28500 | 1 | |
| Tree-based ortholog | 1-to-1 | AT4G28500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G28500 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV8G05840 | 1 | |
| Anchor point | N/A | BV9G06340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G05840 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR01G08620 BR03G50390 | 2 | |
| Tree-based ortholog | 1-to-many | BR01G08620 BR03G50390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR01G08620 BR03G50390 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_007G11480 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_007G11480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G11480 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00083G00980 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00083G00980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00083G00980 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL00G02830 | 1 | |
| Tree-based ortholog | 1-to-1 | CL00G02830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL00G02830 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00037G01500 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00037G01500 | 1 | ||
| Anchor point | N/A | CM00037G01500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G07450 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0011G08900 | 1 | |
| Tree-based ortholog | 1-to-many | EG0011G08900 EG0004G04720 EG0004G04710 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G08900 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G22010 | 1 | |
| Tree-based ortholog | 1-to-1 | FV6G22010 | 1 | ||
| Anchor point | N/A | FV6G22010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G22010 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM06G44250 GM12G33460 GM13G36980 | 3 | |
| Tree-based ortholog | 1-to-many | GM06G44250 GM12G13710 GM12G33460 ... | 8 | ||
| Anchor point | N/A | GM12G33460 GM13G36980 GM06G44250 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G32250 GM13G24320 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR08G15520 | 1 | |
| Tree-based ortholog | 1-to-1 | GR08G15520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G15520 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ3G039990 | 1 | |
| Tree-based ortholog | 1-to-many | LJ3G039990 LJ6G026900 LJ6G026360 ... | 4 | ||
| Anchor point | N/A | LJ3G039990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G010300 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD05G004800 MD10G023170 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD10G023170 MD05G004800 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME02307G00130 | 1 | |
| Tree-based ortholog | 1-to-many | ME02307G00130 ME12216G00030 | 2 | ||
| Anchor point | N/A | ME02307G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02307G00130 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT2G090735 | 1 | |
| Tree-based ortholog | 1-to-many | MT4G078875 MT2G090735 MT2G014680 ... | 5 | ||
| Anchor point | N/A | MT2G090735 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G090735 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS01G48130 | 1 | |
| Tree-based ortholog | 1-to-many | OS05G48850 OS01G48130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G48130 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00251G00100 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00251G00100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00251G00100 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT07G13530 PT17G01670 | 2 | |
| Tree-based ortholog | 1-to-many | PT07G13530 PT17G01670 | 2 | ||
| Anchor point | N/A | PT17G01670 PT07G13530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT17G01670 PT07G13530 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_004G05060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G05060 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29983G00230 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29983G00230 | 1 | ||
| Anchor point | N/A | RC29983G00230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29983G00230 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL07G053590 | 1 | |
| Tree-based ortholog | 1-to-many | SL07G053590 SL02G077610 | 2 | ||
| Anchor point | N/A | SL07G053590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G053590 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST07G021660 | 1 | |
| Tree-based ortholog | 1-to-many | ST07G021660 ST02G020450 | 2 | ||
| Anchor point | N/A | ST07G021660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G021660 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP7G26480 | 1 | |
| Tree-based ortholog | 1-to-1 | TP7G26480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G26480 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0002G18180 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0002G18180 | 1 | ||
| Anchor point | N/A | TC0002G18180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G18180 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV12G02070 | 1 | |
| Tree-based ortholog | 1-to-1 | VV12G02070 | 1 | ||
| Anchor point | N/A | VV12G02070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G02070 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM03G35300 | 1 | |
| Tree-based ortholog | 1-to-many | ZM06G31080 ZM03G35300 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G35300 | 1 |