Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CS00138G00280
(Citrus sinensis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrus sinensis | Orthologous gene family | CS00138G00280 | 1 |  |
| Tree-based ortholog | CS00138G00280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CS00138G00280 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00010G00730 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G00730 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL4G14060 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G23650 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT5G12250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G12250 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV4G14170 BV3G13180 | 2 | |
| Anchor point | N/A | BV3G13170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G13180 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-1 | BR10G21690 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G21690 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_006G10470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G10470 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP39949G00010 | 1 | |
| Anchor point | N/A | CP00092G00750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00074G00110 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR03G10780 CR04G00210 CR06G13080 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR12G16830 CR12G15170 | 2 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL03G11490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G11490 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00024G01330 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00024G01330 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0011G13870 | 1 | |
| Anchor point | N/A | EG0011G13870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G13870 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV7G38520 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G38520 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM03G27970 GM19G30770 | 2 | |
| Anchor point | N/A | GM19G30770 GM03G27970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM03G27970 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR07G35190 | 1 | |
| Anchor point | N/A | GR07G35190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G35190 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G056730 | 1 | |
| Anchor point | N/A | LJ1G056730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G056730 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD12G016690 MD00G445750 MD04G011600 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD01G019160 MD07G018570 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME02960G00340 ME06916G00990 | 2 | |
| Anchor point | N/A | ME06916G00990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02765G00090 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT7G089120 | 1 | |
| Anchor point | N/A | MT7G089120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G089120 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS01G59150 OS01G18050 OS05G34170 | 3 | |
| Anchor point | N/A | OS01G59150 OS05G34170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G18050 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL08G03660 OL12G01340 OL02G02120 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G04460 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00215G00280 PP00215G00270 PP00341G00090 ... | 29 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00218G00030 PP00252G00350 PP00093G00690 ... | 6 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT16G03320 PT01G27270 PT01G27280 ... | 6 | |
| Anchor point | N/A | PT06G03540 PT16G03320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT06G03540 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_007G03680 | 1 | |
| Anchor point | N/A | PPE_007G03680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G03680 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29785G00400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29785G00400 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL10G080940 | 1 | |
| Anchor point | N/A | SL10G080940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G080940 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST10G027210 | 1 | |
| Anchor point | N/A | ST10G027210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G027210 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP6G31390 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G31390 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0009G25010 TC0005G12270 TC0009G25020 | 3 | |
| Anchor point | N/A | TC0005G12270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TC0009G25020 TC0005G12270 | 2 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV08G03620 | 1 | |
| Anchor point | N/A | VV08G03620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G06500 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM03G29180 ZM08G00330 ZM03G10040 ... | 5 | |
| Anchor point | N/A | ZM08G15830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G10040 | 1 |