Integrative Orthology Viewer: CS00049G00110 (Citrus sinensis)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Citrus sinensis | Orthologous gene family | CS00007G03050 CS00016G02430 CS00049G00110 ... | 5 | |
Tree-based ortholog | CS00049G00110 | 1 | ||
Anchor point | CS00007G03050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CS00049G00110 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00045G01180 ATR_00106G00480 | 2 | |
Tree-based ortholog | 1-to-1 | ATR_00106G00480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00106G00480 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G12210 AL1G53330 AL2G03250 ... | 4 | |
Tree-based ortholog | 1-to-many | AL6G36300 AL2G03250 AL1G12210 | 3 | ||
Anchor point | 1-to-1 | AL1G12210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G12210 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G11910 AT1G62290 AT4G04460 | 3 | |
Tree-based ortholog | 1-to-many | AT4G04460 AT1G62290 AT1G11910 | 3 | ||
Anchor point | 1-to-1 | AT1G11910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G11910 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G59530 BV4G08570 BV8G12890 | 3 | |
Tree-based ortholog | 1-to-many | BV0G59530 BV8G12890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G12890 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G04880 BR03G26410 BR08G28530 ... | 6 | |
Tree-based ortholog | 1-to-many | BR09G24290 BR03G26410 BR00G04880 ... | 5 | ||
Anchor point | 1-to-many | BR08G28530 BR09G49980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G49980 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G10980 CRU_002G02610 CRU_002G06740 ... | 4 | |
Tree-based ortholog | 1-to-many | CRU_006G31040 CRU_002G02610 CRU_001G10980 | 3 | ||
Anchor point | 1-to-many | CRU_001G10980 CRU_002G02610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G10980 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00048G02220 CP00087G00940 CP00152G00340 ... | 5 | |
Tree-based ortholog | 1-to-many | CP00087G00940 CP00152G00340 | 2 | ||
Anchor point | 1-to-1 | CP00152G00340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00684G00020 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR04G04480 | 1 | |
Tree-based ortholog | 1-to-1 | CR04G04480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR04G04480 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G21910 CL03G04420 CL10G04600 | 3 | |
Tree-based ortholog | 1-to-1 | CL10G04600 | 1 | ||
Anchor point | 1-to-many | CL01G21910 CL10G04600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G04420 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00001G05450 CM00007G04330 | 2 | |
Tree-based ortholog | 1-to-1 | CM00021G04890 | 1 | ||
Anchor point | 1-to-1 | CM00021G04890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G05450 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G08940 EG0002G14630 EG0004G10860 ... | 6 | |
Tree-based ortholog | 1-to-1 | EG0006G06180 | 1 | ||
Anchor point | 1-to-many | EG0004G10860 EG0006G06180 EG0001G08940 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G06180 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV3G01370 FV3G25660 FV4G18650 ... | 4 | |
Tree-based ortholog | 1-to-1 | FV3G25660 | 1 | ||
Anchor point | 1-to-many | FV3G25660 FV1G16840 FV3G01370 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G25660 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G38730 GM07G39240 GM09G00810 ... | 12 | |
Tree-based ortholog | 1-to-many | GM13G38610 GM12G31880 GM17G01500 ... | 6 | ||
Anchor point | 1-to-many | GM17G01500 GM15G11670 GM09G00810 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM15G11670 GM09G00810 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G09110 GR04G03180 GR04G23520 ... | 7 | |
Tree-based ortholog | 1-to-many | GR04G03180 GR02G09110 | 2 | ||
Anchor point | 1-to-many | GR02G09110 GR10G18240 GR11G01280 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G03180 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G069320 LJ3G004720 | 2 | |
Tree-based ortholog | 1-to-many | LJ3G004720 LJ1G069320 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G069320 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-1 | MD15G033660 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD15G033660 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00111G00040 ME02264G00790 ME03241G00120 ... | 7 | |
Tree-based ortholog | 1-to-many | ME03241G00120 ME07983G00010 | 2 | ||
Anchor point | 1-to-many | ME06598G00370 ME03241G00120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03241G00120 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G484940 MT2G023910 MT2G045420 ... | 6 | |
Tree-based ortholog | 1-to-many | MT4G132420 MT2G023910 | 2 | ||
Anchor point | 1-to-1 | MT2G023910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G132420 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G18630 OS01G44130 OS01G47410 ... | 4 | |
Tree-based ortholog | 1-to-many | OS01G44130 OS05G49200 OS01G47410 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G49200 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL11G03050 | 1 | |
Tree-based ortholog | 1-to-1 | OL11G03050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G03050 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00093G00380 PP00099G00440 PP00113G00100 | 3 | |
Tree-based ortholog | 1-to-many | PP00113G00100 PP00093G00380 PP00099G00440 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00093G00380 PP00113G00100 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G35690 PT02G22830 PT04G00760 ... | 7 | |
Tree-based ortholog | 1-to-1 | PT01G35690 | 1 | ||
Anchor point | 1-to-many | PT11G00760 PT02G22830 PT04G00760 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G35690 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G09680 PPE_003G19490 PPE_004G01630 ... | 5 | |
Tree-based ortholog | 1-to-1 | PPE_004G20830 | 1 | ||
Anchor point | 1-to-many | PPE_003G19490 PPE_004G01630 PPE_004G20830 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G20830 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29842G00530 RC29889G01780 RC30010G00230 ... | 5 | |
Tree-based ortholog | 1-to-1 | RC30064G00250 | 1 | ||
Anchor point | 1-to-many | RC29842G00530 RC30064G00250 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30064G00250 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G101240 SL02G032940 SL02G080880 ... | 6 | |
Tree-based ortholog | 1-to-many | SL07G051850 SL02G032940 SL02G080880 | 3 | ||
Anchor point | 1-to-1 | SL02G080880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G080880 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G039110 ST02G008610 ST02G024010 ... | 6 | |
Tree-based ortholog | 1-to-many | ST07G019130 ST02G008610 ST02G024010 | 3 | ||
Anchor point | 1-to-1 | ST02G024010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G024010 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G10560 TP2G02340 TP2G05940 ... | 4 | |
Tree-based ortholog | 1-to-many | TP6G04440 TP2G02340 TP1G10560 | 3 | ||
Anchor point | 1-to-many | TP2G02340 TP1G10560 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G10560 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G17110 TC0004G31430 TC0004G31440 ... | 7 | |
Tree-based ortholog | 1-to-1 | TC0007G03110 | 1 | ||
Anchor point | 1-to-many | TC0006G21730 TC0007G03100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G03110 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV05G02600 VV10G00710 VV14G10320 ... | 5 | |
Tree-based ortholog | 1-to-1 | VV19G10770 | 1 | ||
Anchor point | 1-to-1 | VV19G10770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G10770 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G42430 ZM03G36900 ZM05G12710 ... | 9 | |
Tree-based ortholog | 1-to-many | ZM03G36900 ZM09G04290 ZM05G12710 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G31390 | 1 |