Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CS00043G00630
(Citrus sinensis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrus sinensis | Orthologous gene family | CS00043G00630 | 1 |  |
| Tree-based ortholog | CS00043G00630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CS00043G00630 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00024G01350 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00024G01350 | 1 | ||
| Anchor point | N/A | ATR_00024G01350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00024G01350 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G12170 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G12170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G12170 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G11880 | 1 | |
| Tree-based ortholog | 1-to-1 | AT1G11880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G11880 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV4G11710 | 1 | |
| Tree-based ortholog | 1-to-1 | BV4G11710 | 1 | ||
| Anchor point | N/A | BV4G11710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G11710 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR08G28550 BR09G50010 | 2 | |
| Tree-based ortholog | 1-to-many | BR08G28550 BR09G50010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G28550 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G10950 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G10950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G10950 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP01833G00020 | 1 | |
| Tree-based ortholog | 1-to-1 | CP01833G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP01833G00020 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR07G01920 | 1 | |
| Tree-based ortholog | 1-to-1 | CR07G01920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G01920 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL08G05720 | 1 | |
| Tree-based ortholog | 1-to-many | CL01G13580 CL08G05720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G05720 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00025G04530 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00025G04530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00025G04530 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0006G18170 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0006G18170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G18170 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV3G36540 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G36540 | 1 | ||
| Anchor point | N/A | FV3G36540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G36540 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM07G34710 | 1 | |
| Tree-based ortholog | 1-to-1 | GM07G34710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM07G34710 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR11G00280 | 1 | |
| Tree-based ortholog | 1-to-1 | GR11G00280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G00280 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G382030 MD03G001170 MD12G013970 | 3 | |
| Tree-based ortholog | 1-to-many | MD03G001170 MD12G013970 MD00G382030 ... | 4 | ||
| Anchor point | N/A | MD03G001170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD03G001170 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME09354G00020 | 1 | |
| Tree-based ortholog | 1-to-1 | ME09354G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09354G00020 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT4G084070 | 1 | |
| Tree-based ortholog | 1-to-1 | MT4G084070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G084070 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS12G31480 | 1 | |
| Tree-based ortholog | 1-to-1 | OS12G31480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G31480 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL02G01690 | 1 | |
| Tree-based ortholog | 1-to-1 | OL02G01690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G01690 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00058G00650 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00058G00650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00058G00650 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT03G21690 | 1 | |
| Tree-based ortholog | 1-to-1 | PT03G21690 | 1 | ||
| Anchor point | N/A | PT01G00860 PT03G21690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT03G21690 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_006G06300 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G06300 | 1 | ||
| Anchor point | N/A | PPE_006G06300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G06300 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29692G00100 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29692G00100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29692G00100 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL01G006000 | 1 | |
| Tree-based ortholog | 1-to-1 | SL01G006000 | 1 | ||
| Anchor point | N/A | SL01G006000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G006000 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G006380 | 1 | |
| Tree-based ortholog | 1-to-1 | ST01G006380 | 1 | ||
| Anchor point | N/A | ST01G006380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G006380 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G10500 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G10500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G10500 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0009G20920 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0009G20920 | 1 | ||
| Anchor point | N/A | TC0009G20920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G20920 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV06G07150 | 1 | |
| Tree-based ortholog | 1-to-1 | VV06G07150 | 1 | ||
| Anchor point | N/A | VV06G07150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G07150 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM03G00050 ZM03G40520 | 2 | |
| Tree-based ortholog | 1-to-many | ZM03G40520 ZM03G00050 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM03G00050 ZM03G40520 | 2 |