Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CS00021G01860
(Citrus sinensis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrus sinensis | Orthologous gene family | CS00021G01860 | 1 |  |
| Tree-based ortholog | CS00021G01860 CS00744G00040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | CS00021G01860 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-many | ATR_00012G01770 ATR_02578G00010 ATR_00010G01300 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00012G01750 ATR_00012G01830 | 2 | ||
| Arabidopsis lyrata | Tree-based ortholog | many-to-many | AL3G12970 AL5G17540 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G17540 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-many | AT3G12550 AT3G48670 AT4G01780 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G48670 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV2G05350 | 1 | |
| Tree-based ortholog | many-to-1 | BV2G05350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G05350 | 1 | ||
| Brassica rapa | Tree-based ortholog | many-to-many | BR05G30290 BR06G16860 BR06G19730 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G16860 | 1 | ||
| Capsella rubella | Tree-based ortholog | many-to-many | CRU_003G11370 CRU_005G13900 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G13900 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00001G04080 | 1 | |
| Tree-based ortholog | many-to-1 | CP00001G04080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00001G04080 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | many-to-1 | CL07G03450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G03450 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00063G00690 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00063G00690 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0007G23280 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G23280 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-1 | FV7G26100 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G26100 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM02G41581 GM14G07370 GM11G34010 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G36280 GM16G24680 GM11G34010 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR10G20140 GR12G07100 | 2 | |
| Tree-based ortholog | many-to-many | GR10G20140 GR10G20130 GR12G07100 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G20140 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-1 | LJ6G022620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G022620 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD00G202910 MD00G389990 MD01G012410 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G389990 MD01G012410 MD00G202910 | 3 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME08265G02160 | 1 | |
| Tree-based ortholog | many-to-1 | ME08265G02160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08265G02160 | 1 | ||
| Medicago truncatula | Tree-based ortholog | many-to-many | MT5G079940 MT3G067855 MT3G067845 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G067815 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS05G06130 OS07G02240 OS01G03570 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G44230 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00063G00810 PP00228G00220 PP00228G00230 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00228G00230 PP00063G00810 PP00374G00020 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-1 | PT10G20270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G20270 | 1 | ||
| Prunus persica | Tree-based ortholog | many-to-1 | PPE_002G22800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G22800 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC27383G00080 | 1 | |
| Tree-based ortholog | many-to-1 | RC27383G00080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27383G00080 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-many | SL06G051810 SL05G054420 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G051810 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-many | ST06G011440 ST05G027400 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G011440 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-many | TP3G10690 TP5G13340 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G13340 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0010G03800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G03800 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV13G05180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G05180 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-many | ZM01G45850 ZM03G36850 ZM03G06340 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G36850 | 1 |