Integrative Orthology Viewer: CS00010G01380 (Citrus sinensis)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Citrus sinensis | Orthologous gene family | CS00001G02540 CS00010G01380 CS00062G00370 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | CS00010G01380 | 1 | ||
Tree-based ortholog | CS00010G01380 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00004G02640 ATR_00024G00470 ATR_00048G00420 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00004G02640 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00004G02640 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL5G31790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G31790 | 1 | ||
Tree-based ortholog | 1-to-many | AL0G02270 AL7G15090 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G05230 AT1G17920 AT1G34650 ... | 15 | |
Anchor point | N/A | AT4G04890 AT4G21750 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G04890 | 1 | ||
Tree-based ortholog | 1-to-1 | AT4G04890 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G14410 BV0G31130 BV1G07640 ... | 5 | |
Anchor point | N/A | BV0G14410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G14410 | 1 | ||
Tree-based ortholog | 1-to-1 | BV0G14410 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G12010 BR01G27310 BR01G35940 ... | 27 | |
Anchor point | N/A | BR09G23940 BR10G02500 BR03G45950 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G23940 | 1 | ||
Tree-based ortholog | 1-to-1 | BR09G23940 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G04170 CRU_001G16850 CRU_001G31090 ... | 16 | |
Anchor point | N/A | CRU_006G31610 CRU_007G18710 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G18710 | 1 | ||
Tree-based ortholog | 1-to-1 | CRU_006G31610 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00007G01380 CP00008G02160 CP00018G02090 ... | 9 | |
Anchor point | N/A | CP00097G00470 CP00198G00180 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00008G02160 | 1 | ||
Tree-based ortholog | 1-to-many | CP00198G00180 CP00008G02160 CP00178G00210 ... | 8 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G22220 CL02G00290 CL02G08740 ... | 12 | |
Anchor point | N/A | CL01G22220 CL03G04760 CL05G15820 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G08740 | 1 | ||
Tree-based ortholog | 1-to-many | CL02G08740 CL02G00290 CL05G12030 ... | 5 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00001G00290 CM00001G05820 CM00006G10030 ... | 10 | |
Anchor point | N/A | CM00001G05820 CM00007G04020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00037G00660 | 1 | ||
Tree-based ortholog | 1-to-many | CM00037G00660 CM00034G04410 CM00042G01340 ... | 5 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G14050 EG0003G24610 EG0004G18290 ... | 10 | |
Anchor point | N/A | EG0005G31120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G31120 | 1 | ||
Tree-based ortholog | 1-to-many | EG0001G14050 EG0011G06750 EG0003G24610 ... | 4 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G29870 FV1G16290 FV1G16400 ... | 9 | |
Anchor point | N/A | FV3G00530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G00530 | 1 | ||
Tree-based ortholog | 1-to-many | FV1G16150 FV1G16290 FV1G28350 ... | 4 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G01850 GM01G45070 GM03G01860 ... | 29 | |
Anchor point | N/A | GM12G32050 GM13G36471 GM13G38430 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G00570 GM01G45070 | 2 | ||
Tree-based ortholog | 1-to-many | GM06G46000 GM06G23276 GM12G32050 ... | 15 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G17100 GR03G18490 GR03G18500 ... | 14 | |
Anchor point | N/A | GR11G01620 GR10G17780 GR02G08450 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G17780 | 1 | ||
Tree-based ortholog | 1-to-many | GR08G05420 GR08G17280 GR13G10020 ... | 8 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G001030 LJ1G033560 LJ2G008640 ... | 6 | |
Anchor point | N/A | LJ1G001020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G001030 | 1 | ||
Tree-based ortholog | 1-to-many | LJ6G020170 LJ5G003690 LJ3G012020 ... | 5 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G113710 MD00G159360 MD00G230300 ... | 22 | |
Anchor point | N/A | MD05G001810 MD10G026020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD10G026020 MD05G001810 | 2 | ||
Tree-based ortholog | 1-to-many | MD17G008270 MD00G417240 MD00G492290 ... | 20 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00341G01100 ME03942G00540 ME04133G00040 ... | 12 | |
Anchor point | N/A | ME03241G00670 ME12753G00130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12753G00130 | 1 | ||
Tree-based ortholog | 1-to-many | ME10540G00050 ME06906G00090 ME07520G00520 ... | 4 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT00G12020 MT1G101280 MT2G030570 ... | 15 | |
Anchor point | N/A | MT2G088470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G088470 | 1 | ||
Tree-based ortholog | 1-to-many | MT1G105420 MT4G047800 MT2G088470 ... | 21 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G55549 OS02G45250 OS04G48070 ... | 9 | |
Anchor point | N/A | OS01G57890 OS08G04190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G08820 | 1 | ||
Tree-based ortholog | 1-to-many | OS01G57890 OS07G47130 OS07G24350 | 3 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00059G00720 PP00084G01160 PP00173G00480 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00084G01160 PP00209G00060 PP00059G00720 ... | 4 | ||
Tree-based ortholog | 1-to-many | PP00209G00060 PP00173G00480 PP00084G01160 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G04540 PT01G13780 PT01G18410 ... | 17 | |
Anchor point | N/A | PT11G02500 PT04G02040 PT01G41950 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT11G02500 PT04G02040 | 2 | ||
Tree-based ortholog | 1-to-many | PT14G15200 PT02G23020 PT04G07480 ... | 6 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G15480 PPE_002G27880 PPE_003G00260 ... | 8 | |
Anchor point | N/A | PPE_004G02300 PPE_004G19720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G02300 | 1 | ||
Tree-based ortholog | 1-to-many | PPE_003G19840 PPE_003G00260 PPE_004G19740 ... | 5 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29600G00040 RC29842G01280 RC30068G01320 ... | 8 | |
Anchor point | N/A | RC28166G00560 RC29842G01280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29842G01280 | 1 | ||
Tree-based ortholog | 1-to-many | RC29600G00040 RC30171G00200 RC28166G00560 | 3 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G091630 SL02G080260 SL03G026070 ... | 28 | |
Anchor point | N/A | SL02G080260 SL03G031760 SL10G005330 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G005330 | 1 | ||
Tree-based ortholog | 1-to-many | SL07G026570 SL02G080260 SL12G005830 ... | 32 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G030790 ST02G023450 ST03G008270 ... | 25 | |
Anchor point | N/A | ST10G006320 ST02G023450 ST03G008270 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G008270 | 1 | ||
Tree-based ortholog | 1-to-many | ST02G023450 ST12G011920 ST03G008270 ... | 25 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G04080 TP1G15990 TP2G11680 ... | 15 | |
Anchor point | N/A | TP7G19920 TP6G04070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G04070 | 1 | ||
Tree-based ortholog | 1-to-1 | TP6G04070 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G36320 TC0002G31280 TC0003G17380 ... | 8 | |
Anchor point | N/A | TC0007G04480 TC0006G20880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G20880 | 1 | ||
Tree-based ortholog | 1-to-many | TC0002G31280 TC0004G06650 TC0001G24950 ... | 6 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV02G01740 VV04G07090 VV09G05000 ... | 8 | |
Anchor point | N/A | VV19G00570 VV10G00420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G00420 | 1 | ||
Tree-based ortholog | 1-to-many | VV12G12230 VV04G07090 VV19G00570 ... | 4 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G22370 ZM02G03810 ZM03G06790 ... | 13 | |
Anchor point | N/A | ZM10G07610 ZM03G29850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G06840 ZM10G07610 | 2 | ||
Tree-based ortholog | 1-to-many | ZM03G11400 ZM03G29850 | 2 |