Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CS00006G02890
(Citrus sinensis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrus sinensis | Orthologous gene family | CS00006G02890 | 1 |  |
| Tree-based ortholog | CS00006G02890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CS00006G02890 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00033G01100 ATR_00032G02780 ATR_00059G00890 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00022G00210 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-many | AL3G32990 AL3G32960 AL1G32540 ... | 4 | |
| Anchor point | N/A | AL4G12210 AL2G25540 AL1G22280 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G25540 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-many | AT2G12646 AT1G31040 AT3G60670 | 3 | |
| Anchor point | N/A | AT1G76590 AT1G21000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G76590 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV8G16540 BV5G16500 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G19170 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR03G39050 BR09G07680 BR09G27640 ... | 7 | |
| Anchor point | N/A | BR06G15210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR07G12760 BR04G15930 | 2 | ||
| Capsella rubella | Tree-based ortholog | 1-to-many | CRU_003G26920 CRU_001G28110 CRU_005G26010 | 3 | |
| Anchor point | N/A | CRU_001G19640 CRU_002G22160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G22160 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00046G00780 CP00030G01160 CP00029G01300 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00005G01230 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR02G06290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G01900 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL01G25700 CL03G04100 CL06G02600 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G17680 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00003G05630 CM00007G00350 CM00001G05060 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G03360 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0009G07960 | 1 | |
| Tree-based ortholog | 1-to-many | EG0009G07960 EG0004G08610 | 2 | ||
| Anchor point | N/A | EG0006G15790 EG0009G07960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G32940 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV1G03970 FV3G11180 FV7G11840 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G45410 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM17G11470 GM13G23360 GM09G12330 ... | 11 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G19695 GM12G08810 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR06G13730 | 1 | |
| Tree-based ortholog | 1-to-1 | GR06G13730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G13730 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ6G014060 LJ6G018180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G050210 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD10G019090 MD00G307810 MD00G511750 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G018970 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME08847G00120 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06206G00130 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT4G116300 MT2G036170 MT4G094680 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G062160 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS02G44260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G33370 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL20G03290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G03290 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00003G02470 PP00441G00050 PP00003G02440 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00102G00400 PP00133G00370 PP00001G02460 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT05G13030 | 1 | |
| Tree-based ortholog | 1-to-1 | PT05G13030 | 1 | ||
| Anchor point | N/A | PT02G00220 PT05G13030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT09G00320 PT01G21240 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_007G27300 PPE_004G10970 PPE_002G13770 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G14510 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29673G00340 | 1 | |
| Anchor point | N/A | RC30170G07580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29589G00590 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL12G010470 SL07G007320 SL02G068510 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G085800 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST12G007390 ST07G007560 ST02G014640 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G028990 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-many | TP3G26690 TP1G26890 TP5G02570 | 3 | |
| Anchor point | N/A | TP5G31760 TP1G18700 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G10750 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0005G15950 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0001G04280 | 1 | ||
| Anchor point | N/A | TC0001G04280 TC0008G09440 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G15950 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV11G01530 VV01G09600 VV03G08200 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G10850 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM04G20550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G08550 | 1 |