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Integrative Orthology Viewer:
CS00003G04300
(Citrus sinensis)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Citrus sinensis | Orthologous gene family | CS00003G04300 | 1 |  |
| Tree-based ortholog | CS00003G04300 | 1 | ||
| Anchor point | CS00111G00480 CS00015G01670 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | CS00003G04300 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00010G04510 | 1 | |
| Anchor point | many-to-many | ATR_00119G00530 ATR_00010G04510 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G04510 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL2G17850 | 1 | |
| Tree-based ortholog | 1-to-many | AL2G17850 AL5G08370 AL6G15040 ... | 4 | ||
| Anchor point | many-to-1 | AL2G17850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G17850 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G69600 | 1 | |
| Tree-based ortholog | 1-to-many | AT1G69600 AT5G60480 AT3G28920 ... | 5 | ||
| Anchor point | many-to-1 | AT1G69600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G69600 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G24260 | 1 | |
| Anchor point | many-to-many | BV6G02700 BV5G00910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G24260 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR07G26380 | 1 | |
| Tree-based ortholog | 1-to-many | BR07G26380 BR02G19910 BR03G09930 ... | 7 | ||
| Anchor point | many-to-many | BR02G19910 BR07G26380 BR06G13450 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G26380 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_002G15310 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_002G15310 CRU_008G20560 CRU_005G06890 ... | 5 | ||
| Anchor point | many-to-many | CRU_002G15310 CRU_005G06870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G15310 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00140G00530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00140G00530 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL10G13140 | 1 | |
| Anchor point | many-to-many | CL10G13140 CL04G12060 CL05G25260 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G18710 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00011G08200 | 1 | |
| Anchor point | many-to-many | CM00016G04190 CM00011G08200 CM00001G00710 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM31355G00010 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0007G00510 EG0009G00200 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G00510 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV6G44540 | 1 | |
| Anchor point | many-to-many | FV6G44540 FV0G05550 FV5G13300 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G44540 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM18G49390 GM09G37300 GM13G05420 | 3 | |
| Anchor point | many-to-many | GM17G10830 GM20G04880 GM02G11950 ... | 10 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G11950 GM01G05810 GM07G35760 | 3 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR05G14140 | 1 | |
| Tree-based ortholog | 1-to-many | GR05G14140 GR13G08550 GR12G05430 ... | 4 | ||
| Anchor point | many-to-many | GR13G08550 GR12G05430 GR07G03730 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G08550 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G017160 | 1 | |
| Anchor point | many-to-1 | LJ4G028780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G017160 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD09G003660 | 1 | |
| Anchor point | many-to-many | MD13G004730 MD09G003650 MD06G015680 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G004730 MD00G335670 MD00G335690 ... | 4 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME03834G00050 | 1 | |
| Tree-based ortholog | 1-to-1 | ME11341G00720 | 1 | ||
| Anchor point | many-to-many | ME11581G01500 ME03834G00050 ME12794G02160 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03834G00050 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT6G012280 | 1 | |
| Anchor point | many-to-many | MT7G010300 MT8G467340 MT6G012220 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G010300 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS06G23030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G24820 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00230G00360 PP00165G00520 PP00153G00520 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00165G00520 PP00003G02180 PP00012G00020 ... | 6 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT04G12650 PT17G08290 | 2 | |
| Anchor point | many-to-many | PT10G16940 PT17G08270 PT08G08600 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G12650 PT17G08290 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_003G24670 | 1 | |
| Anchor point | many-to-many | PPE_001G28600 PPE_003G24670 PPE_005G19810 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G28600 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29813G00370 | 1 | |
| Tree-based ortholog | 1-to-1 | RC27895G00010 | 1 | ||
| Anchor point | many-to-many | RC30138G02490 RC29813G00370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29813G00370 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL02G067320 SL02G067310 | 2 | |
| Anchor point | many-to-many | SL05G007580 SL03G116070 SL02G067310 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G067320 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST02G013180 | 1 | |
| Tree-based ortholog | 1-to-many | ST02G013180 ST02G013170 | 2 | ||
| Anchor point | many-to-many | ST02G034890 ST05G010300 ST02G013170 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G013180 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-many | TP5G24720 TP2G17550 TP6G28860 ... | 4 | |
| Anchor point | many-to-many | TP6G28860 TP5G24720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G24720 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0002G34470 | 1 | |
| Tree-based ortholog | 1-to-many | TC0002G34470 TC0004G08590 | 2 | ||
| Anchor point | many-to-many | TC0004G08560 TC0002G34470 TC0003G08970 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G34470 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV14G02170 | 1 | |
| Anchor point | many-to-many | VV14G02170 VV01G12070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G11970 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM01G38100 ZM04G14390 ZM02G30620 ... | 4 | |
| Anchor point | many-to-many | ZM01G38100 ZM07G13960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G14390 ZM07G13970 ZM01G38100 | 3 |