Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_127G00010
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_127G00010 | 1 |  |
| Tree-based ortholog | CRU_007G05650 CRU_127G00010 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_127G00010 CRU_007G05650 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR_00059G01440 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00059G01440 | 1 | ||
| Arabidopsis lyrata | Tree-based ortholog | many-to-1 | AL7G06620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G06620 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | many-to-1 | AT4G34350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G34350 | 1 | ||
| Beta vulgaris | Tree-based ortholog | many-to-1 | BV9G13930 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV9G13930 | 1 | ||
| Brassica rapa | Tree-based ortholog | many-to-many | BR08G14050 BR01G03800 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR08G14050 | 1 | ||
| Carica papaya | Tree-based ortholog | many-to-1 | CP00062G01010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00062G01010 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR08G03990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR08G03990 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | many-to-1 | CL09G18380 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G05590 | 1 | ||
| Citrus sinensis | Tree-based ortholog | many-to-many | CS01378G00020 CS00184G00140 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00184G00140 | 1 | ||
| Cucumis melo | Tree-based ortholog | many-to-1 | CM00050G01400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00034G00050 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0003G05180 EG0009G09870 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0009G09870 | 1 | ||
| Fragaria vesca | Tree-based ortholog | many-to-many | FV2G02190 FV2G02210 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV2G02210 | 1 | ||
| Glycine max | Tree-based ortholog | many-to-many | GM11G12870 GM12G05010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM11G12870 GM12G05010 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | many-to-many | GR08G01900 GR13G05230 GR05G22910 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR08G01900 | 1 | ||
| Lotus japonicus | Tree-based ortholog | many-to-1 | LJ3G046490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ3G046490 | 1 | ||
| Malus domestica | Tree-based ortholog | many-to-many | MD03G013330 MD00G482900 MD09G019160 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G482900 | 1 | ||
| Manihot esculenta | Tree-based ortholog | many-to-many | ME08799G00090 ME08799G00110 ME04740G00130 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME08799G00110 ME04740G00130 | 2 | ||
| Medicago truncatula | Tree-based ortholog | many-to-many | MT1G090787 MT4G069030 MT4G069070 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G069030 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS03G52170 OS03G52180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G52170 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL08G01050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL08G01050 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | many-to-many | PP00032G01270 PP00210G00180 PP00187G00250 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00032G01270 PP00210G00180 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | many-to-many | PT09G11160 PT04G15040 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT09G11160 | 1 | ||
| Prunus persica | Tree-based ortholog | many-to-1 | PPE_008G12480 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_008G12470 | 1 | ||
| Ricinus communis | Tree-based ortholog | many-to-1 | RC29851G00950 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29851G00950 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | many-to-1 | SL01G109300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G109300 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | many-to-1 | ST01G046610 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G046610 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | many-to-1 | TP7G32140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G32140 | 1 | ||
| Theobroma cacao | Tree-based ortholog | many-to-1 | TC0002G11640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0002G11640 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | VV03G08040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV03G08040 | 1 | ||
| Zea mays | Tree-based ortholog | many-to-1 | ZM01G51760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G51760 | 1 |