Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_008G10990
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_008G10990 | 1 |  |
| Tree-based ortholog | CRU_008G10990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_008G10990 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00016G01720 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00016G01720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00016G01720 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL8G15370 | 1 | |
| Tree-based ortholog | 1-to-1 | AL8G15370 | 1 | ||
| Anchor point | N/A | AL8G15370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G15370 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G51140 | 1 | |
| Tree-based ortholog | 1-to-1 | AT5G51140 | 1 | ||
| Anchor point | N/A | AT5G51140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G51140 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV5G05630 | 1 | |
| Tree-based ortholog | 1-to-1 | BV5G05630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G05630 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR02G16920 BR03G14680 | 2 | |
| Tree-based ortholog | 1-to-many | BR02G16920 BR03G14680 | 2 | ||
| Anchor point | N/A | BR03G14680 BR02G16920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G16920 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00004G01410 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00004G01370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00004G01410 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR17G01400 | 1 | |
| Tree-based ortholog | 1-to-1 | CR17G01400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR17G01400 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL06G18630 | 1 | |
| Tree-based ortholog | 1-to-1 | CL06G18630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G18630 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00035G00350 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00035G00350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00035G00350 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00089G00320 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00089G00320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00089G00320 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-many | EG0002G00590 EG0002G00600 EG0006G13040 ... | 6 | |
| Tree-based ortholog | 1-to-many | EG0002G00600 EG0006G13040 EG0002G00590 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0002G00590 EG0002G00600 EG0006G13040 | 3 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G09370 | 1 | |
| Tree-based ortholog | 1-to-1 | FV0G09370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G09370 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM06G17550 | 1 | |
| Tree-based ortholog | 1-to-1 | GM06G17550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM06G17550 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR03G11930 | 1 | |
| Tree-based ortholog | 1-to-1 | GR03G11930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G11930 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G000270 | 1 | |
| Malus domestica | Orthologous gene family | 1-to-many | MD06G012020 MD14G014550 | 2 | |
| Tree-based ortholog | 1-to-many | MD14G014550 MD06G012020 MD06G012040 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD06G012020 MD14G014550 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME01701G00420 | 1 | |
| Tree-based ortholog | 1-to-1 | ME01701G00420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01701G00420 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT3G098940 | 1 | |
| Tree-based ortholog | 1-to-1 | MT3G098940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G098940 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS02G30840 | 1 | |
| Tree-based ortholog | 1-to-1 | OS02G30840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G30840 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL11G00110 | 1 | |
| Tree-based ortholog | 1-to-many | OL09G02110 OL16G00500 OL11G00110 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G00110 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00051G00130 | 1 | |
| Tree-based ortholog | 1-to-many | PP00051G00130 PP00051G00160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00051G00130 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT15G10130 | 1 | |
| Tree-based ortholog | 1-to-1 | PT15G10130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT15G10130 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_005G15400 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_005G15400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G15400 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30147G03520 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30147G03520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G03520 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G097550 | 1 | |
| Tree-based ortholog | 1-to-1 | SL03G097550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G097550 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G018260 | 1 | |
| Tree-based ortholog | 1-to-1 | ST03G018260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G018260 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G13350 | 1 | |
| Tree-based ortholog | 1-to-1 | TP6G13350 | 1 | ||
| Anchor point | N/A | TP6G13350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G13350 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0003G13800 | 1 | |
| Tree-based ortholog | 1-to-many | TC0003G13780 TC0003G13800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G13800 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV17G08560 | 1 | |
| Tree-based ortholog | 1-to-1 | VV17G08560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G08560 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G12130 | 1 | |