Integrative Orthology Viewer: CRU_008G09590 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_001G30390 CRU_008G09590 | 2 | |
Tree-based ortholog | CRU_008G09590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_008G09590 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00099G00330 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00099G00330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00099G00330 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G34910 AL8G13770 | 2 | |
Tree-based ortholog | 1-to-1 | AL8G13770 | 1 | ||
Anchor point | N/A | AL8G13770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL8G13770 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G33700 AT5G49900 | 2 | |
Tree-based ortholog | 1-to-1 | AT5G49900 | 1 | ||
Anchor point | N/A | AT5G49900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G49900 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV6G25030 | 1 | |
Tree-based ortholog | 1-to-1 | BV6G25030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G25030 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G24460 BR09G25940 | 2 | |
Tree-based ortholog | 1-to-1 | BR03G24460 | 1 | ||
Anchor point | N/A | BR03G24460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G24460 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00059G01220 | 1 | |
Tree-based ortholog | 1-to-1 | CP00021G00790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00021G00790 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL11G18410 | 1 | |
Tree-based ortholog | 1-to-1 | CL11G18410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G00670 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00519G00030 | 1 | |
Tree-based ortholog | 1-to-1 | CS00519G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00519G00030 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00051G02230 | 1 | |
Tree-based ortholog | 1-to-1 | CM00051G02230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00051G02230 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G24970 EG0009G23570 | 2 | |
Tree-based ortholog | 1-to-1 | EG0009G23570 | 1 | ||
Anchor point | N/A | EG0009G23570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G23570 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV5G34650 | 1 | |
Tree-based ortholog | 1-to-1 | FV5G34650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G34650 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-1 | GM07G40310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM07G40310 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR08G04670 | 1 | |
Tree-based ortholog | 1-to-1 | GR08G04670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G04670 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ5G017180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G017180 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD00G327220 | 1 | |
Tree-based ortholog | 1-to-many | MD00G423040 MD00G184320 | 2 | ||
Anchor point | N/A | MD08G022680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G184320 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02421G00370 ME02421G00380 ME02538G00510 ... | 4 | |
Tree-based ortholog | 1-to-1 | ME02538G00510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02538G00510 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G134760 | 1 | |
Tree-based ortholog | 1-to-1 | MT4G134760 | 1 | ||
Anchor point | N/A | MT4G134760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G134760 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS07G26210 OS11G13810 | 2 | |
Tree-based ortholog | 1-to-1 | OS11G13810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G13810 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00040G00960 PP00134G00180 | 2 | |
Tree-based ortholog | 1-to-many | PP00134G00180 PP00040G00960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00134G00180 PP00040G00960 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT03G00340 PT04G22720 PT19G07280 | 3 | |
Tree-based ortholog | 1-to-many | PT03G00340 PT04G22720 | 2 | ||
Anchor point | N/A | PT04G22720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G00340 PT04G22720 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G53390 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_001G53390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G53390 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29685G00060 | 1 | |
Tree-based ortholog | 1-to-1 | RC29685G00060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29685G00060 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G103230 SL11G042460 | 2 | |
Tree-based ortholog | 1-to-1 | SL01G103230 | 1 | ||
Anchor point | N/A | SL01G103230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G103230 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G040210 ST11G019560 | 2 | |
Tree-based ortholog | 1-to-1 | ST01G040210 | 1 | ||
Anchor point | N/A | ST01G040210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G040210 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G29070 TP6G11440 | 2 | |
Tree-based ortholog | 1-to-1 | TP6G11440 | 1 | ||
Anchor point | N/A | TP6G11440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G11440 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G01340 | 1 | |
Tree-based ortholog | 1-to-1 | TC0002G01340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G01340 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G23240 VV05G09840 VV12G06870 | 3 | |
Tree-based ortholog | 1-to-1 | VV12G06870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G06870 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G42310 ZM04G03390 | 2 | |
Tree-based ortholog | 1-to-1 | ZM04G03390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G03390 | 1 |