Integrative Orthology Viewer: CRU_007G19310 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_006G32010 CRU_007G19310 | 2 | |
Tree-based ortholog | CRU_007G19310 | 1 | ||
Anchor point | CRU_006G32010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_007G19310 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00155G00360 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00155G00360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00155G00360 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL6G37290 AL7G21540 | 2 | |
Tree-based ortholog | 1-to-1 | AL7G21540 | 1 | ||
Anchor point | 1-to-many | AL6G37290 AL7G21540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL7G21540 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT4G05330 AT4G21160 | 2 | |
Tree-based ortholog | 1-to-1 | AT4G21160 | 1 | ||
Anchor point | 1-to-many | AT4G05330 AT4G21160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G21160 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV8G14130 | 1 | |
Tree-based ortholog | 1-to-1 | BV8G14130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G14130 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G45690 BR09G23500 | 2 | |
Tree-based ortholog | 1-to-many | BR03G45690 BR01G11530 | 2 | ||
Anchor point | 1-to-many | BR01G11530 BR09G23500 BR03G45690 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G45690 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00166G00310 | 1 | |
Tree-based ortholog | 1-to-1 | CP00166G00310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00223G00090 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G14350 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G25200 CL03G05980 CL03G09510 | 3 | |
Tree-based ortholog | 1-to-many | CL01G25200 CL03G09510 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CL03G09510 CL01G25200 | 2 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00010G00340 | 1 | |
Tree-based ortholog | 1-to-1 | CS00010G00340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00010G00340 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00001G09370 | 1 | |
Tree-based ortholog | 1-to-1 | CM00007G00910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G09370 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0004G01190 | 1 | |
Tree-based ortholog | 1-to-1 | EG0004G01190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G01190 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV3G15010 | 1 | |
Tree-based ortholog | 1-to-1 | FV3G15010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G15010 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G29940 GM08G13070 GM09G02830 ... | 4 | |
Tree-based ortholog | 1-to-many | GM09G02830 GM15G13700 GM05G29940 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G13070 GM05G29940 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR11G00450 | 1 | |
Tree-based ortholog | 1-to-many | GR10G24650 GR11G00450 GR09G11520 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G00450 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ6G003650 LJ4G051330 LJ2G002690 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G002690 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-1 | MD00G243200 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G243200 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME07122G00020 ME07478G01060 | 2 | |
Tree-based ortholog | 1-to-many | ME07122G00020 ME07478G01060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07478G01060 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G030230 MT8G088320 | 2 | |
Tree-based ortholog | 1-to-many | MT2G030230 MT8G088320 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G088320 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS06G40704 | 1 | |
Tree-based ortholog | 1-to-many | OS02G49070 OS06G40704 OS02G10480 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS06G40704 OS02G10480 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G02300 | 1 | |
Physcomitrella patens | Orthologous gene family | many-to-many | PP00033G01280 PP00191G00060 PP00275G00530 | 3 | |
Tree-based ortholog | 1-to-many | PP00191G00060 PP00275G00530 PP00033G01280 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00275G00530 PP00033G01280 PP00191G00060 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G37200 PT11G09850 PT11G10090 | 3 | |
Tree-based ortholog | 1-to-many | PT11G10090 PT11G09850 PT01G37200 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT11G09850 PT01G37200 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_004G08620 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_004G08620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G08620 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30075G00460 | 1 | |
Tree-based ortholog | 1-to-1 | RC30075G00460 | 1 | ||
Anchor point | 1-to-1 | RC30075G00460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30075G00460 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL02G024020 | 1 | |
Tree-based ortholog | 1-to-1 | SL02G024020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G024020 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST02G007750 | 1 | |
Tree-based ortholog | 1-to-1 | ST02G007750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G007750 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP6G03720 TP7G19240 | 2 | |
Tree-based ortholog | 1-to-1 | TP7G19240 | 1 | ||
Anchor point | 1-to-many | TP6G03720 TP7G19240 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G19240 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0006G00200 | 1 | |
Tree-based ortholog | 1-to-1 | TC0006G00200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G00200 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV10G05470 | 1 | |
Tree-based ortholog | 1-to-1 | VV10G05470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G05470 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM04G22910 ZM05G23310 ZM05G38910 | 3 | |
Tree-based ortholog | 1-to-many | ZM04G22910 ZM05G38910 ZM08G08840 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G23310 | 1 |