Integrative Orthology Viewer: CRU_006G16060 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_003G03000 CRU_006G16060 | 2 | |
Tree-based ortholog | CRU_006G16060 | 1 | ||
Anchor point | CRU_003G03000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_006G16060 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00004G00420 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00004G00420 | 1 | ||
Anchor point | 1-to-1 | ATR_00004G00420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00004G00420 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G03440 AL6G18190 | 2 | |
Tree-based ortholog | 1-to-1 | AL6G18190 | 1 | ||
Anchor point | 1-to-many | AL3G03440 AL6G18190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G03440 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G03920 AT5G18180 | 2 | |
Tree-based ortholog | 1-to-1 | AT5G18180 | 1 | ||
Anchor point | 1-to-many | AT5G18180 AT3G03920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G03920 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV3G06330 | 1 | |
Tree-based ortholog | 1-to-1 | BV3G06330 | 1 | ||
Anchor point | 1-to-1 | BV3G06330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G06330 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G08920 BR03G07820 BR07G00770 | 3 | |
Tree-based ortholog | 1-to-many | BR02G08920 BR03G07820 BR07G00770 | 3 | ||
Anchor point | 1-to-many | BR02G08920 BR07G00770 BR03G07820 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR02G08920 BR07G00770 BR03G07820 | 3 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00051G01160 | 1 | |
Tree-based ortholog | 1-to-1 | CP00051G01160 | 1 | ||
Anchor point | 1-to-1 | CP00051G01160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00051G01160 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR13G01460 | 1 | |
Tree-based ortholog | 1-to-1 | CR13G01460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G01460 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL04G05360 | 1 | |
Tree-based ortholog | 1-to-1 | CL04G05360 | 1 | ||
Anchor point | 1-to-1 | CL04G05360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G05360 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00117G00340 | 1 | |
Tree-based ortholog | 1-to-1 | CS00117G00340 | 1 | ||
Anchor point | 1-to-1 | CS00117G00340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00117G00340 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00010G00180 | 1 | |
Tree-based ortholog | 1-to-1 | CM00010G00180 | 1 | ||
Anchor point | 1-to-1 | CM00010G00180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00010G00180 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV1G29200 | 1 | |
Tree-based ortholog | 1-to-1 | FV1G29200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G29200 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM16G04570 GM19G28740 | 2 | |
Tree-based ortholog | 1-to-many | GM16G04570 GM19G28740 | 2 | ||
Anchor point | 1-to-many | GM19G28740 GM16G04570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM16G04570 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR04G24450 GR07G34340 | 2 | |
Tree-based ortholog | 1-to-many | GR07G34340 GR04G24450 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR07G34340 GR04G24450 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G054280 | 1 | |
Tree-based ortholog | 1-to-1 | LJ1G054280 | 1 | ||
Anchor point | 1-to-1 | LJ1G054280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G054280 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G359160 MD05G024530 MD10G004760 | 3 | |
Tree-based ortholog | 1-to-many | MD00G359160 MD05G024530 MD10G004760 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD05G024530 MD00G359160 MD10G004760 | 3 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G085640 | 1 | |
Tree-based ortholog | 1-to-1 | MT7G085640 | 1 | ||
Anchor point | 1-to-1 | MT7G085640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G085640 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS11G37080 | 1 | |
Tree-based ortholog | 1-to-1 | OS11G37080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G37080 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00129G00410 PP00229G00050 | 2 | |
Tree-based ortholog | 1-to-many | PP00229G00050 PP00129G00410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00129G00410 PP00229G00050 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT13G05840 PT19G03490 | 2 | |
Tree-based ortholog | 1-to-many | PT13G05840 PT19G03490 | 2 | ||
Anchor point | 1-to-many | PT19G03490 PT13G05840 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT19G03490 PT13G05840 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29950G00160 | 1 | |
Tree-based ortholog | 1-to-1 | RC29950G00160 | 1 | ||
Anchor point | 1-to-1 | RC29950G00160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29950G00160 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL10G078540 | 1 | |
Tree-based ortholog | 1-to-1 | SL10G078540 | 1 | ||
Anchor point | 1-to-1 | SL10G078540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G078540 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G02890 TP6G26140 | 2 | |
Tree-based ortholog | 1-to-many | TP6G26140 TP3G02890 | 2 | ||
Anchor point | 1-to-many | TP6G26140 TP3G02890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G02890 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G29270 | 1 | |
Tree-based ortholog | 1-to-1 | TC0005G29270 | 1 | ||
Anchor point | 1-to-1 | TC0005G29270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G29270 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV08G08430 | 1 | |
Tree-based ortholog | 1-to-1 | VV08G08430 | 1 | ||
Anchor point | 1-to-1 | VV08G08430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G08430 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM04G32740 | 1 | |
Tree-based ortholog | 1-to-many | ZM04G32740 ZM02G43730 ZM07G18460 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G32740 | 1 |