Integrative Orthology Viewer: CRU_006G10560 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_002G11060 CRU_002G15420 CRU_002G22470 ... | 10 | |
Tree-based ortholog | CRU_006G10560 | 1 | ||
Anchor point | CRU_006G17310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_006G10560 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00010G03920 ATR_00030G00680 ATR_00044G00470 ... | 5 | |
Tree-based ortholog | 1-to-1 | ATR_00063G00170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00063G00170 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G12630 AL2G17970 AL2G25870 ... | 8 | |
Tree-based ortholog | 1-to-1 | AL6G12250 | 1 | ||
Anchor point | 1-to-many | AL6G12250 AL6G19680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G12250 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G65920 AT1G69710 AT1G76950 ... | 9 | |
Tree-based ortholog | 1-to-1 | AT5G12350 | 1 | ||
Anchor point | 1-to-many | AT5G12350 AT5G19420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G12350 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV1G12410 BV2G16710 BV4G13680 ... | 5 | |
Tree-based ortholog | 1-to-many | BV4G13680 BV2G16710 | 2 | ||
Anchor point | 1-to-1 | BV4G13680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G13680 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G13410 BR01G27960 BR02G06010 ... | 12 | |
Tree-based ortholog | 1-to-many | BR10G21610 BR02G06010 | 2 | ||
Anchor point | 1-to-many | BR10G21610 BR02G06010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G21610 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00044G00440 CP00049G00390 CP00128G00040 ... | 6 | |
Tree-based ortholog | 1-to-many | CP00157G00690 CP41834G00010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00157G00690 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR16G01210 | 1 | |
Tree-based ortholog | 1-to-many | CR16G04810 CR01G05700 CR12G09930 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR05G00770 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G22970 CL08G06600 CL09G09320 ... | 6 | |
Tree-based ortholog | 1-to-1 | CL02G22970 | 1 | ||
Anchor point | 1-to-1 | CL02G22970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G22970 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00002G00680 CS00003G04130 CS00009G00520 ... | 7 | |
Tree-based ortholog | 1-to-many | CS00120G00410 CS00251G00050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00251G00050 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00008G03440 CM00009G00250 CM00022G03940 ... | 7 | |
Tree-based ortholog | 1-to-many | CM00022G03940 CM00024G01680 | 2 | ||
Anchor point | 1-to-many | CM00024G01680 CM00022G03940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00024G01680 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G22490 EG0006G24270 EG0007G19440 ... | 6 | |
Tree-based ortholog | 1-to-many | EG0010G06180 EG0010G10450 | 2 | ||
Anchor point | 1-to-1 | EG0010G06180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G06180 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G05710 FV2G22600 FV2G48040 ... | 5 | |
Tree-based ortholog | 1-to-many | FV2G48040 FV7G16780 | 2 | ||
Anchor point | 1-to-1 | FV2G48040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G48040 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G00790 GM02G09250 GM02G44920 ... | 19 | |
Tree-based ortholog | 1-to-many | GM02G44920 GM14G03830 GM18G14970 ... | 4 | ||
Anchor point | 1-to-many | GM14G03830 GM02G44920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G44920 GM14G03830 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G02560 GR04G01460 GR05G08050 ... | 11 | |
Tree-based ortholog | 1-to-many | GR06G12380 GR04G01460 GR11G21410 | 3 | ||
Anchor point | 1-to-1 | GR06G12380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G01460 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ6G000250 LJ6G011350 | 2 | |
Tree-based ortholog | 1-to-1 | LJ6G011350 | 1 | ||
Anchor point | 1-to-1 | LJ6G011350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G011350 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G096780 MD00G119840 MD00G255110 ... | 14 | |
Tree-based ortholog | 1-to-many | MD03G014680 MD11G014960 MD00G096780 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD11G014960 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01551G00910 ME03834G00200 ME05230G00190 ... | 11 | |
Tree-based ortholog | 1-to-many | ME06916G01430 ME08473G00230 ME08873G00160 ... | 4 | ||
Anchor point | 1-to-1 | ME08473G00230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06916G01430 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G042800 MT1G099220 MT3G064560 ... | 7 | |
Tree-based ortholog | 1-to-1 | MT5G089900 | 1 | ||
Anchor point | 1-to-1 | MT5G089900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G089900 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G50470 OS01G72320 OS01G73410 ... | 9 | |
Tree-based ortholog | 1-to-many | OS05G31920 OS01G72320 | 2 | ||
Anchor point | 1-to-1 | OS05G31920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G72320 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL10G01110 | 1 | |
Tree-based ortholog | 1-to-1 | OL10G01110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G01110 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00051G01070 PP00126G00850 PP00126G00900 | 3 | |
Tree-based ortholog | 1-to-many | PP00126G00900 PP00126G00850 PP00051G01070 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00126G00850 PP00126G00900 PP00051G01070 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G02690 PT01G27690 PT02G07030 ... | 9 | |
Tree-based ortholog | 1-to-many | PT09G07180 PT01G27690 PT03G19760 ... | 4 | ||
Anchor point | 1-to-many | PT09G07180 PT01G27690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT09G07180 PT01G27690 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G03930 PPE_001G28380 PPE_002G01950 ... | 6 | |
Tree-based ortholog | 1-to-many | PPE_004G29590 PPE_002G01950 | 2 | ||
Anchor point | 1-to-1 | PPE_004G29590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G29590 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC27985G00010 RC29200G00070 RC29811G00140 ... | 7 | |
Tree-based ortholog | 1-to-many | RC29811G00140 RC30131G03460 | 2 | ||
Anchor point | 1-to-1 | RC29811G00140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29811G00140 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G036390 SL02G081250 SL03G005590 ... | 8 | |
Tree-based ortholog | 1-to-many | SL12G099740 SL11G065120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G065120 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G008270 ST02G024370 ST03G005840 ... | 8 | |
Tree-based ortholog | 1-to-many | ST12G031710 ST11G020470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G020470 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G20920 TP5G14260 TP5G20990 ... | 9 | |
Tree-based ortholog | 1-to-1 | TP6G31290 | 1 | ||
Anchor point | 1-to-many | TP6G24990 TP6G31290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G31290 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G34780 TC0003G08670 TC0004G06190 ... | 7 | |
Tree-based ortholog | 1-to-many | TC0009G24660 TC0010G16000 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G24660 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G26310 VV01G12300 VV04G07010 ... | 6 | |
Tree-based ortholog | 1-to-many | VV06G10760 VV00G26310 | 2 | ||
Anchor point | 1-to-1 | VV06G10760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G10760 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G06280 ZM02G08840 ZM02G38370 ... | 11 | |
Tree-based ortholog | 1-to-many | ZM08G27730 ZM03G20740 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G27730 | 1 |