Integrative Orthology Viewer: CRU_006G04490 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_005G21330 CRU_006G04490 CRU_006G04520 | 3 | |
Tree-based ortholog | CRU_006G04490 CRU_006G04520 | 2 | ||
Anchor point | CRU_001G06190 CRU_005G21330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_006G04490 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00029G03780 | 1 | |
Tree-based ortholog | many-to-many | ATR_00029G03760 ATR_00029G03670 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G03780 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G14250 AL5G26080 AL6G05340 | 3 | |
Tree-based ortholog | many-to-1 | AL6G05340 | 1 | ||
Anchor point | many-to-many | AL6G05340 AL5G26080 AL1G06860 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G05340 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G29690 AT3G55870 AT5G05730 | 3 | |
Tree-based ortholog | many-to-1 | AT5G05730 | 1 | ||
Anchor point | many-to-many | AT1G07270 AT3G55870 AT5G05730 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G05730 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV7G05190 BV7G05210 | 2 | |
Tree-based ortholog | many-to-many | BV7G05210 BV2G04110 BV7G05230 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G05210 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G02070 BR10G23960 | 2 | |
Tree-based ortholog | many-to-many | BR10G23960 BR03G02070 | 2 | ||
Anchor point | many-to-many | BR03G02070 BR10G00830 BR10G23960 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G02070 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00019G01920 | 1 | |
Tree-based ortholog | many-to-1 | CP00112G00390 | 1 | ||
Anchor point | many-to-1 | CP00019G01920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G01920 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR06G14820 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G14820 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL04G00660 CL04G00680 CL11G01130 | 3 | |
Tree-based ortholog | many-to-many | CL04G00660 CL11G01050 CL02G19900 | 3 | ||
Anchor point | many-to-1 | CL11G01050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G01130 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00021G00790 CS00026G00950 | 2 | |
Tree-based ortholog | many-to-many | CS00021G00800 CS00026G00940 CS00021G00790 | 3 | ||
Anchor point | many-to-many | CS00021G00790 CS00026G00940 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G00790 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00008G02410 CM00010G02420 | 2 | |
Tree-based ortholog | many-to-many | CM00008G02350 CM00084G00210 | 2 | ||
Anchor point | many-to-1 | CM00008G02350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00010G02420 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0007G24230 | 1 | |
Tree-based ortholog | many-to-many | EG0010G02060 EG0002G18000 | 2 | ||
Anchor point | many-to-many | EG0007G24230 EG0010G02060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G24230 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G29150 | 1 | |
Tree-based ortholog | many-to-1 | FV7G29150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G29150 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM10G43210 GM18G03263 GM18G03270 ... | 4 | |
Tree-based ortholog | many-to-1 | GM18G03256 | 1 | ||
Anchor point | many-to-many | GM18G03256 GM02G42300 GM14G06590 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM18G03270 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G11550 GR09G32220 | 2 | |
Tree-based ortholog | many-to-1 | GR09G32220 | 1 | ||
Anchor point | many-to-many | GR12G07620 GR01G11550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G32220 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G073710 LJ5G040360 | 2 | |
Tree-based ortholog | many-to-1 | LJ5G040360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G040360 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G031450 MD00G170730 MD00G175910 ... | 5 | |
Tree-based ortholog | many-to-many | MD00G207840 MD14G017050 MD11G006420 ... | 19 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G207840 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03150G00330 ME08265G03110 | 2 | |
Tree-based ortholog | many-to-1 | ME08265G03110 | 1 | ||
Anchor point | many-to-1 | ME08265G03100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08265G03110 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G114520 MT3G070290 MT3G076770 ... | 4 | |
Tree-based ortholog | many-to-1 | MT1G114520 | 1 | ||
Anchor point | many-to-many | MT5G082260 MT3G070290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT3G467000 MT3G076770 MT3G070290 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G15780 OS03G61120 | 2 | |
Tree-based ortholog | many-to-many | OS03G15780 OS01G04900 OS01G63710 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G61120 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL07G01130 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G01130 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00077G00900 PP00154G00470 PP00154G00780 | 3 | |
Tree-based ortholog | many-to-many | PP00154G00470 PP00154G00780 PP00077G00900 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00077G00900 PP00154G00780 PP00154G00470 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT09G04430 PT10G19060 | 2 | |
Tree-based ortholog | many-to-many | PT10G19060 PT08G06660 | 2 | ||
Anchor point | many-to-many | PT10G19060 PT09G04430 PT08G06650 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G19060 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G23840 | 1 | |
Tree-based ortholog | many-to-many | PPE_002G23840 PPE_002G23830 PPE_006G00440 | 3 | ||
Anchor point | many-to-1 | PPE_002G23830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G23840 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29669G00390 RC29681G00290 | 2 | |
Tree-based ortholog | many-to-1 | RC29669G00390 | 1 | ||
Anchor point | many-to-1 | RC29669G00370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29669G00390 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G005980 SL06G006100 | 2 | |
Tree-based ortholog | many-to-many | SL06G019200 SL06G076860 SL06G005980 | 3 | ||
Anchor point | many-to-1 | SL06G005980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G006100 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST06G006020 | 1 | |
Tree-based ortholog | many-to-many | ST06G032620 ST06G005900 ST06G005920 | 3 | ||
Anchor point | many-to-1 | ST06G032620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G006020 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP4G12410 TP6G37170 | 2 | |
Tree-based ortholog | many-to-1 | TP6G37170 | 1 | ||
Anchor point | many-to-1 | TP6G37160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G37170 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0009G29890 TC0010G02140 | 2 | |
Tree-based ortholog | many-to-many | TC0010G02140 TC0010G02150 TC0009G29910 ... | 5 | ||
Anchor point | many-to-1 | TC0010G02140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G02140 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV06G02040 VV13G10700 | 2 | |
Tree-based ortholog | many-to-1 | VV13G10700 | 1 | ||
Anchor point | many-to-1 | VV13G10710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G02040 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G10660 ZM01G58430 ZM05G01210 | 3 | |
Tree-based ortholog | many-to-many | ZM01G58430 ZM03G26500 ZM01G10660 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G01210 | 1 |