Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_005G26740
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_005G26740 | 1 |  |
| Tree-based ortholog | CRU_005G26740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_005G26740 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00013G01060 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00013G01060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00013G01060 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G32170 | 1 | |
| Tree-based ortholog | 1-to-1 | AL5G32170 | 1 | ||
| Anchor point | N/A | AL5G32170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G32170 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G61470 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G61470 | 1 | ||
| Anchor point | N/A | AT3G61470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G61470 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV2G17640 | 1 | |
| Tree-based ortholog | 1-to-1 | BV2G17640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G17640 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR04G00890 BR07G16920 | 2 | |
| Tree-based ortholog | 1-to-1 | BR04G00890 | 1 | ||
| Anchor point | N/A | BR07G16920 BR04G00890 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR07G16920 BR04G00890 | 2 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00043G00470 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00043G00470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00043G00470 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR06G07710 CR10G01870 CR10G07450 ... | 9 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR06G05380 CR16G07580 | 2 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL11G07800 | 1 | |
| Tree-based ortholog | 1-to-1 | CL11G07800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G07800 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00003G00530 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00003G00530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G00530 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00016G01760 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00016G01760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G01760 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0002G29020 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0002G29020 | 1 | ||
| Anchor point | N/A | EG0002G04490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G29020 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV0G12820 | 1 | |
| Tree-based ortholog | 1-to-1 | FV0G12820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G12820 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM03G42310 GM07G05320 GM16G01870 | 3 | |
| Tree-based ortholog | 1-to-many | GM07G05320 GM03G42310 GM16G01870 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G05320 GM16G01870 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR02G18340 GR08G16520 | 2 | |
| Tree-based ortholog | 1-to-many | GR02G18340 GR08G16520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR08G16520 GR02G18340 | 2 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ6G029020 LJ1G023100 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G023100 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD13G009060 MD16G007380 | 2 | |
| Tree-based ortholog | 1-to-1 | MD13G009060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G009060 MD16G007380 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME03219G00740 ME06711G00880 | 2 | |
| Tree-based ortholog | 1-to-many | ME03219G00740 ME06711G00880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03219G00740 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT8G023790 | 1 | |
| Tree-based ortholog | 1-to-1 | MT8G023790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G023790 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS07G38960 | 1 | |
| Tree-based ortholog | 1-to-1 | OS07G38960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G38960 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL09G04080 | 1 | |
| Tree-based ortholog | 1-to-many | OL09G04080 OL02G01560 OL15G02140 ... | 10 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL09G04080 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00032G00010 PP00241G00340 PP00330G00180 ... | 5 | |
| Tree-based ortholog | 1-to-many | PP00651G00010 PP00241G00340 PP00330G00180 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00651G00010 PP00241G00340 PP00330G00180 | 3 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT00G14990 PT01G05670 PT03G17150 | 3 | |
| Tree-based ortholog | 1-to-many | PT01G05670 PT00G14990 PT03G17150 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G17150 PT00G14990 PT01G05670 | 3 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G23510 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G23510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G23510 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29929G01510 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29929G01510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29929G01510 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL10G006230 | 1 | |
| Tree-based ortholog | 1-to-1 | SL10G006230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G006230 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST10G005350 | 1 | |
| Tree-based ortholog | 1-to-1 | ST10G005350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G005350 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G01930 | 1 | |
| Tree-based ortholog | 1-to-1 | TP5G01930 | 1 | ||
| Anchor point | N/A | TP5G01930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G01930 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0002G20450 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0002G20450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G20450 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV01G04750 | 1 | |
| Tree-based ortholog | 1-to-1 | VV01G04750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G04750 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM02G37540 ZM07G25280 | 2 | |
| Tree-based ortholog | 1-to-many | ZM02G37540 ZM07G25280 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM07G25280 ZM02G37540 | 2 |