Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_005G24860
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_005G24860 | 1 |  |
| Tree-based ortholog | CRU_005G24860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_005G24860 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00029G01170 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00029G01170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G01170 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G30040 | 1 | |
| Tree-based ortholog | 1-to-1 | AL5G30040 | 1 | ||
| Anchor point | N/A | AL5G30040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G30040 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G59530 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G59530 | 1 | ||
| Anchor point | N/A | AT3G59530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G59530 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV3G07740 | 1 | |
| Tree-based ortholog | 1-to-1 | BV3G07740 | 1 | ||
| Anchor point | N/A | BV3G07740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G07740 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR04G01910 BR09G39240 | 2 | |
| Tree-based ortholog | 1-to-many | BR09G39240 BR04G01910 | 2 | ||
| Anchor point | N/A | BR04G01910 BR09G39240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G39240 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00009G03010 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00009G03010 | 1 | ||
| Anchor point | N/A | CP00009G03010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00009G03010 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR12G15270 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G15270 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL05G08210 | 1 | |
| Tree-based ortholog | 1-to-1 | CL05G08210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G08210 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00557G00110 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00557G00110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00557G00110 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00006G09110 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00006G09110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G09110 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0001G00830 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0001G00830 | 1 | ||
| Anchor point | N/A | EG0001G00830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G00830 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV2G17470 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G17470 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM13G42020 GM15G03370 | 2 | |
| Tree-based ortholog | 1-to-many | GM13G42020 GM15G03370 | 2 | ||
| Anchor point | N/A | GM15G03370 GM13G42020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM15G03370 GM13G42020 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR06G22940 | 1 | |
| Tree-based ortholog | 1-to-1 | GR06G22940 | 1 | ||
| Anchor point | N/A | GR06G22940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G22940 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ1G008730 LJ1G058260 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G058260 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD00G081840 | 1 | |
| Tree-based ortholog | 1-to-1 | MD00G081840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G081840 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME03160G00080 ME09798G00210 | 2 | |
| Tree-based ortholog | 1-to-many | ME09798G00210 ME03160G00080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09798G00210 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT2G099030 | 1 | |
| Tree-based ortholog | 1-to-1 | MT2G099030 | 1 | ||
| Anchor point | N/A | MT2G099030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G099030 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G15710 | 1 | |
| Tree-based ortholog | 1-to-1 | OS03G15710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G15710 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00055G00390 PP00381G00070 PP00108G00030 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00381G00070 PP00350G00060 PP00108G00030 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT07G13070 PT17G02760 | 2 | |
| Tree-based ortholog | 1-to-many | PT17G02760 PT07G13070 | 2 | ||
| Anchor point | N/A | PT07G13070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT17G02760 PT07G13070 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G18940 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G18940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G18940 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29577G00090 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29577G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29577G00090 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G053130 | 1 | |
| Tree-based ortholog | 1-to-1 | SL03G053130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G053130 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G010650 | 1 | |
| Tree-based ortholog | 1-to-1 | ST03G010650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G010650 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G03630 | 1 | |
| Tree-based ortholog | 1-to-1 | TP5G03630 | 1 | ||
| Anchor point | N/A | TP5G03630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G03630 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0004G18090 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0004G18090 | 1 | ||
| Anchor point | N/A | TC0004G18090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G18090 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV05G01000 | 1 | |
| Tree-based ortholog | 1-to-1 | VV05G01000 | 1 | ||
| Anchor point | N/A | VV05G01000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G01000 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM01G52880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G52880 | 1 |