Integrative Orthology Viewer: CRU_005G22580 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_004G12120 CRU_005G21780 CRU_005G22580 ... | 7 | |
Tree-based ortholog | CRU_005G22580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_005G22580 CRU_007G27020 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00033G01540 | 1 | |
Tree-based ortholog | 1-to-many | ATR_00033G01530 ATR_00033G01540 ATR_00013G00650 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00033G01540 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G16030 AL5G26570 AL7G39640 | 3 | |
Tree-based ortholog | 1-to-many | AL7G39640 AL5G26570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL7G39640 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G31170 AT3G56300 AT5G38830 | 3 | |
Tree-based ortholog | 1-to-many | AT3G56300 AT5G38830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G38830 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G71550 BV2G11050 | 2 | |
Tree-based ortholog | 1-to-1 | BV0G71550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G71550 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G00360 BR03G12630 BR04G08470 ... | 4 | |
Tree-based ortholog | 1-to-many | BR04G08470 BR02G00360 BR03G12630 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR02G00360 BR04G08470 | 2 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00019G00760 CP01077G00010 | 2 | |
Tree-based ortholog | 1-to-many | CP00019G00760 CP01077G00010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP01077G00010 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR01G12460 | 1 | |
Tree-based ortholog | 1-to-many | CR03G06310 CR01G12460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR01G12460 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G09150 CL05G17850 CL10G06460 | 3 | |
Tree-based ortholog | 1-to-many | CL10G06460 CL03G09150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL03G09150 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00008G00600 CS00051G00960 | 2 | |
Tree-based ortholog | 1-to-many | CS00051G00960 CS00008G00600 CS03552G00010 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00008G00600 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00005G00160 CM01596G04380 | 2 | |
Tree-based ortholog | 1-to-1 | CM00005G00160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00005G00160 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G24550 EG0003G13580 EG0004G10910 ... | 4 | |
Tree-based ortholog | 1-to-1 | EG0004G10910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0002G24550 EG0004G10910 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G01300 FV2G39630 | 2 | |
Tree-based ortholog | 1-to-1 | FV0G01300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G01300 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G06910 GM06G06990 GM10G41880 ... | 4 | |
Tree-based ortholog | 1-to-many | GM10G41880 GM20G25160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM06G06990 GM04G06910 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR08G24580 GR08G24650 GR10G13000 ... | 4 | |
Tree-based ortholog | 1-to-many | GR11G13940 GR09G43340 GR01G15610 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR08G24580 GR08G24650 GR10G13000 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G039120 | 1 | |
Tree-based ortholog | 1-to-1 | LJ5G039040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ5G039120 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G366050 MD13G002480 MD15G006570 ... | 4 | |
Tree-based ortholog | 1-to-many | MD15G006570 MD13G002480 MD16G001450 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD13G002480 MD16G001450 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03049G00100 ME03604G00570 | 2 | |
Tree-based ortholog | 1-to-many | ME03049G00100 ME03604G00570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME03604G00570 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G110350 MT3G106560 MT6G072080 | 3 | |
Tree-based ortholog | 1-to-many | MT1G110350 MT6G072080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT6G072080 MT1G110350 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G04960 OS09G38420 OS10G32570 | 3 | |
Tree-based ortholog | 1-to-many | OS10G32570 OS03G04960 OS09G38420 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS09G38420 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL10G00120 | 1 | |
Tree-based ortholog | 1-to-many | OL10G00120 OL03G05140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL10G00120 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00504G00040 | 1 | |
Tree-based ortholog | 1-to-many | PP00083G00250 PP10015G00010 PP00504G00040 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00504G00040 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT10G12250 PT18G02430 | 2 | |
Tree-based ortholog | 1-to-many | PT18G02430 PT10G12250 PT08G12290 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT10G12250 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G32340 PPE_001G48840 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_001G32340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G32340 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28616G00080 RC29848G01460 | 2 | |
Tree-based ortholog | 1-to-many | RC29848G01460 RC30066G00180 RC28616G00080 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC28616G00080 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G076390 SL05G009190 | 2 | |
Tree-based ortholog | 1-to-1 | SL05G009190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL05G009190 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST04G029270 ST05G008230 | 2 | |
Tree-based ortholog | 1-to-1 | ST05G008230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST05G008230 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP4G13650 TP7G03100 | 2 | |
Tree-based ortholog | 1-to-1 | TP7G03100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G03100 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0004G18010 TC0009G16430 | 2 | |
Tree-based ortholog | 1-to-many | TC0004G18010 TC0009G16430 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G16430 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G12370 VV03G02000 VV04G12990 | 3 | |
Tree-based ortholog | 1-to-many | VV00G12370 VV03G02000 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV00G12370 VV03G02000 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G58640 ZM02G34870 ZM06G25780 ... | 5 | |
Tree-based ortholog | 1-to-many | ZM06G25780 ZM10G24030 ZM08G17620 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM01G58640 ZM02G34870 | 2 |