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Integrative Orthology Viewer:
CRU_005G22090
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_005G22090 CRU_006G33610 | 2 |  |
| Tree-based ortholog | CRU_005G22090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_005G22090 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00066G02270 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00066G02270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00066G02270 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G26940 AL6G39060 | 2 | |
| Tree-based ortholog | 1-to-1 | AL5G26940 | 1 | ||
| Anchor point | N/A | AL5G26940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G26940 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G56640 AT4G02350 | 2 | |
| Tree-based ortholog | 1-to-1 | AT3G56640 | 1 | ||
| Anchor point | N/A | AT3G56640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G56640 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV7G12790 | 1 | |
| Tree-based ortholog | 1-to-1 | BV3G13310 | 1 | ||
| Anchor point | N/A | BV3G13310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G13310 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR05G15720 BR09G00490 | 2 | |
| Tree-based ortholog | 1-to-1 | BR09G37280 | 1 | ||
| Anchor point | N/A | BR09G37280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G37280 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00151G00140 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00092G00660 | 1 | ||
| Anchor point | N/A | CP00092G00660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00151G00140 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR07G01250 | 1 | |
| Tree-based ortholog | 1-to-1 | CR07G01250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G01250 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL05G11380 CL09G05280 CL10G14530 | 3 | |
| Tree-based ortholog | 1-to-many | CL10G14530 CL05G11380 | 2 | ||
| Anchor point | N/A | CL10G14530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G14530 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00138G00410 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00138G00410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00138G00410 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00011G06760 CM00038G01600 | 2 | |
| Tree-based ortholog | 1-to-many | CM00011G06760 CM00038G01600 | 2 | ||
| Anchor point | N/A | CM00011G06760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G06760 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G18400 EG0008G09470 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0001G18400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G18400 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV2G28260 FV5G14220 | 2 | |
| Tree-based ortholog | 1-to-1 | FV5G14220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G14220 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G37331 GM14G00390 | 2 | |
| Tree-based ortholog | 1-to-many | GM10G13870 GM02G19110 GM16G09730 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G22300 GM16G09730 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR07G12740 GR08G14420 GR09G26350 ... | 4 | |
| Tree-based ortholog | 1-to-many | GR09G26350 GR13G13970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G13970 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ1G071450 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G071450 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G052690 MD00G454220 MD03G024680 ... | 5 | |
| Tree-based ortholog | 1-to-many | MD13G004450 MD00G454220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD13G004450 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME04457G00570 ME08494G00150 | 2 | |
| Tree-based ortholog | 1-to-1 | ME08494G00150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08494G00150 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-1 | MT7G108785 | 1 | |
| Tree-based ortholog | 1-to-many | MT1G050505 MT1G087380 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G050505 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G24950 | 1 | |
| Tree-based ortholog | 1-to-many | OS10G27990 OS03G06760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G06760 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00054G01470 PP00144G00520 | 2 | |
| Tree-based ortholog | 1-to-many | PP00144G00520 PP00054G01470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00144G00520 PP00054G01470 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT16G03210 | 1 | |
| Tree-based ortholog | 1-to-many | PT16G03210 PT06G03420 | 2 | ||
| Anchor point | N/A | PT06G03420 PT16G03210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT06G03420 PT16G03210 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G28910 PPE_008G27540 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_001G28910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G28910 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29940G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29940G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29940G00010 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL09G075280 SL12G096290 | 2 | |
| Tree-based ortholog | 1-to-1 | SL12G096290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G096290 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST09G022850 ST12G028640 | 2 | |
| Tree-based ortholog | 1-to-1 | ST12G028640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G028640 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP4G23250 TP5G05920 TP6G02230 | 3 | |
| Tree-based ortholog | 1-to-1 | TP5G05920 | 1 | ||
| Anchor point | N/A | TP4G23250 TP5G05920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G05920 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0008G18530 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0008G18530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G18530 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV07G08550 VV08G03740 | 2 | |
| Tree-based ortholog | 1-to-1 | VV08G03740 | 1 | ||
| Anchor point | N/A | VV08G03740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G03740 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM10G07260 | 1 | |
| Tree-based ortholog | 1-to-many | ZM05G11190 ZM01G54380 ZM09G19510 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G19510 | 1 |