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Integrative Orthology Viewer:
CRU_005G19400
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_001G00420 CRU_001G38010 CRU_002G01360 ... | 11 |  |
| Tree-based ortholog | CRU_005G19400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_005G19400 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00001G02450 ATR_00009G02620 ATR_00029G02430 ... | 4 | |
| Tree-based ortholog | 1-to-1 | ATR_00029G02430 | 1 | ||
| Anchor point | N/A | ATR_00029G02430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G02430 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL0G10940 AL1G45570 AL2G01630 ... | 12 | |
| Tree-based ortholog | 1-to-1 | AL5G24070 | 1 | ||
| Anchor point | N/A | AL5G24070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G24070 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G01740 AT1G50990 AT1G63500 ... | 12 | |
| Tree-based ortholog | 1-to-1 | AT3G54030 | 1 | ||
| Anchor point | N/A | AT3G54030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G54030 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G08470 BV0G36830 BV1G06850 ... | 6 | |
| Tree-based ortholog | 1-to-1 | BV7G05730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G05730 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G03060 BR01G09200 BR01G39060 ... | 19 | |
| Tree-based ortholog | 1-to-1 | BR04G04980 | 1 | ||
| Anchor point | N/A | BR04G04980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G04980 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00006G04050 CP00018G02360 CP00026G02150 ... | 7 | |
| Tree-based ortholog | 1-to-1 | CP00056G00610 | 1 | ||
| Anchor point | N/A | CP00056G00610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00056G00610 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G02550 CL02G11410 CL02G20090 ... | 8 | |
| Tree-based ortholog | 1-to-1 | CL04G07380 | 1 | ||
| Anchor point | N/A | CL04G07380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G07380 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00001G00110 CS00001G02940 CS00002G06420 ... | 7 | |
| Tree-based ortholog | 1-to-1 | CS00083G00390 | 1 | ||
| Anchor point | N/A | CS00083G00390 CS00026G00500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00026G00500 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00002G01540 CM00005G06450 CM00006G03330 ... | 8 | |
| Tree-based ortholog | 1-to-1 | CM00002G01540 | 1 | ||
| Anchor point | N/A | CM00002G01540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00002G01540 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G22420 EG0004G14890 EG0005G01450 ... | 7 | |
| Tree-based ortholog | 1-to-1 | EG0002G22420 | 1 | ||
| Anchor point | N/A | EG0011G25380 EG0002G22420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G22420 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV2G11660 FV2G37490 FV3G21210 ... | 7 | |
| Tree-based ortholog | 1-to-1 | FV6G11690 | 1 | ||
| Anchor point | N/A | FV6G11690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G11690 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G26690 GM02G48030 GM03G01300 ... | 13 | |
| Tree-based ortholog | 1-to-many | GM01G26690 GM03G15830 | 2 | ||
| Anchor point | N/A | GM11G14240 GM01G26690 GM12G06200 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM03G15830 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G11440 GR02G20510 GR02G25920 ... | 13 | |
| Tree-based ortholog | 1-to-1 | GR02G25920 | 1 | ||
| Anchor point | N/A | GR03G12660 GR02G25920 GR06G17950 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G17950 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G045710 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ4G045710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G045710 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G014650 MD00G017210 MD00G029100 ... | 15 | |
| Tree-based ortholog | 1-to-1 | MD00G482650 | 1 | ||
| Anchor point | N/A | MD12G014130 MD04G011410 MD12G016450 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G482650 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02658G01390 ME02943G00860 ME03150G00690 ... | 10 | |
| Tree-based ortholog | 1-to-1 | ME03651G00350 | 1 | ||
| Anchor point | N/A | ME03651G00350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03651G00350 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT4G020070 MT4G065003 MT4G098740 ... | 7 | |
| Tree-based ortholog | 1-to-many | MT2G097860 MT4G065003 MT4G020070 | 3 | ||
| Anchor point | N/A | MT4G020070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G020070 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G04050 OS03G61010 OS04G58750 ... | 5 | |
| Tree-based ortholog | 1-to-many | OS03G61010 OS04G58750 | 2 | ||
| Anchor point | N/A | OS03G61010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G61010 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00009G01660 PP00012G01100 PP00027G01570 ... | 8 | |
| Tree-based ortholog | 1-to-many | PP00009G01660 PP00156G00740 PP00122G00310 ... | 8 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00122G00310 PP00156G00740 PP00012G01100 ... | 5 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G10470 PT01G24640 PT02G01180 ... | 14 | |
| Tree-based ortholog | 1-to-many | PT06G09390 PT16G10580 | 2 | ||
| Anchor point | N/A | PT16G10580 PT06G09390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT16G10580 PT06G09390 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G36400 PPE_002G11330 PPE_002G16300 ... | 10 | |
| Tree-based ortholog | 1-to-1 | PPE_006G27440 | 1 | ||
| Anchor point | N/A | PPE_006G27440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G27440 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC27798G00340 RC29709G00600 RC29751G00320 ... | 7 | |
| Tree-based ortholog | 1-to-1 | RC27798G00340 | 1 | ||
| Anchor point | N/A | RC27798G00340 RC29751G00320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27798G00340 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G080880 SL04G082260 SL06G076600 ... | 7 | |
| Tree-based ortholog | 1-to-1 | SL10G085000 | 1 | ||
| Anchor point | N/A | SL10G085000 SL09G011750 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G011750 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G028310 ST04G035700 ST06G032390 ... | 7 | |
| Tree-based ortholog | 1-to-1 | ST10G023820 | 1 | ||
| Anchor point | N/A | ST09G012190 ST06G032390 ST10G023820 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G012190 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G00560 TP2G01110 TP2G11400 ... | 12 | |
| Tree-based ortholog | 1-to-1 | TP5G08360 | 1 | ||
| Anchor point | N/A | TP5G08360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G08360 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G35770 TC0002G04540 TC0003G27410 ... | 7 | |
| Tree-based ortholog | 1-to-1 | TC0005G02520 | 1 | ||
| Anchor point | N/A | TC0009G30440 TC0005G02520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G02520 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV02G02420 VV02G06510 VV03G03910 ... | 7 | |
| Tree-based ortholog | 1-to-1 | VV08G13600 | 1 | ||
| Anchor point | N/A | VV08G13600 VV06G02540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G13600 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G02480 ZM01G22020 ZM01G58250 ... | 7 | |
| Tree-based ortholog | 1-to-many | ZM05G01260 ZM01G58250 ZM02G00110 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G01260 ZM01G58250 | 2 |