Integrative Orthology Viewer: CRU_005G19190 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_005G19190 CRU_005G21000 | 2 | |
Tree-based ortholog | CRU_005G19190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_005G19190 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00009G00950 ATR_00012G03220 | 2 | |
Tree-based ortholog | 1-to-1 | ATR_00009G00950 | 1 | ||
Anchor point | N/A | ATR_00012G03220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00009G00950 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G23880 AL5G25720 | 2 | |
Tree-based ortholog | 1-to-1 | AL5G23880 | 1 | ||
Anchor point | N/A | AL5G23880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G23880 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G53830 AT3G55580 | 2 | |
Tree-based ortholog | 1-to-1 | AT3G53830 | 1 | ||
Anchor point | N/A | AT3G53830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G53830 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV2G05870 | 1 | |
Tree-based ortholog | 1-to-1 | BV2G05870 | 1 | ||
Anchor point | N/A | BV2G05870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G05870 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR04G05110 BR09G36450 | 2 | |
Tree-based ortholog | 1-to-1 | BR04G05110 | 1 | ||
Anchor point | N/A | BR04G05110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G05110 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00169G00040 | 1 | |
Tree-based ortholog | 1-to-1 | CP00169G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00169G00040 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR05G00770 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-1 | CL07G03230 | 1 | |
Tree-based ortholog | 1-to-1 | CL04G07840 | 1 | ||
Anchor point | N/A | CL04G07840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G07840 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00021G01410 CS00280G00170 | 2 | |
Tree-based ortholog | 1-to-1 | CS00280G00170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00280G00170 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00002G00880 | 1 | |
Tree-based ortholog | 1-to-1 | CM00002G00880 | 1 | ||
Anchor point | N/A | CM00002G00880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00002G00880 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0010G10820 EG0011G25760 | 2 | |
Tree-based ortholog | 1-to-1 | EG0011G25760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G10820 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV6G12410 FV7G25610 | 2 | |
Tree-based ortholog | 1-to-1 | FV6G12410 | 1 | ||
Anchor point | N/A | FV6G12410 FV7G28160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G12410 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G41810 GM07G16400 GM11G34470 ... | 6 | |
Tree-based ortholog | 1-to-many | GM18G40600 GM07G16400 | 2 | ||
Anchor point | N/A | GM07G16400 GM18G03870 GM18G40600 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM07G16400 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR11G26870 GR12G07260 | 2 | |
Tree-based ortholog | 1-to-many | GR11G26870 GR12G07260 | 2 | ||
Anchor point | N/A | GR11G26870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G26870 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G004120 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G019130 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G034920 MD00G272410 MD01G012760 ... | 4 | |
Tree-based ortholog | 1-to-many | MD00G272410 MD12G013720 | 2 | ||
Anchor point | N/A | MD01G012760 MD12G013720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD12G013720 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03098G00020 ME08265G02400 ME08910G00140 ... | 4 | |
Tree-based ortholog | 1-to-many | ME09958G00010 ME03098G00020 | 2 | ||
Anchor point | N/A | ME08265G02400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03098G00020 ME09958G00010 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G069030 MT7G063440 | 2 | |
Tree-based ortholog | 1-to-1 | MT7G063440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G063440 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G62810 OS05G38270 | 2 | |
Tree-based ortholog | 1-to-many | OS01G62810 OS05G38270 | 2 | ||
Anchor point | N/A | OS01G62810 OS05G38270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G62810 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL17G00560 | 1 | |
Physcomitrella patens | Orthologous gene family | many-to-many | PP00010G02160 PP00044G01110 PP00137G00490 ... | 4 | |
Tree-based ortholog | 1-to-many | PP00044G01110 PP00010G02160 PP00137G00490 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00044G01110 PP00196G00400 PP00010G02160 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G05980 PT10G19910 PT16G10170 | 3 | |
Tree-based ortholog | 1-to-1 | PT16G10170 | 1 | ||
Anchor point | N/A | PT16G10170 PT06G08990 PT10G19910 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT16G10170 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G23130 PPE_006G26800 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_006G26800 | 1 | ||
Anchor point | N/A | PPE_006G26800 PPE_002G23130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G26800 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC28670G00040 RC30143G00220 | 2 | |
Tree-based ortholog | 1-to-1 | RC28670G00040 | 1 | ||
Anchor point | N/A | RC30143G00220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28670G00040 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL05G052950 SL09G011160 | 2 | |
Tree-based ortholog | 1-to-1 | SL09G011160 | 1 | ||
Anchor point | N/A | SL09G011160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G052950 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST05G025650 ST09G008820 | 2 | |
Tree-based ortholog | 1-to-1 | ST09G008820 | 1 | ||
Anchor point | N/A | ST09G008820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G025650 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP5G06900 TP5G08550 | 2 | |
Tree-based ortholog | 1-to-1 | TP5G08550 | 1 | ||
Anchor point | N/A | TP5G08550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G08550 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G03190 TC0010G03750 | 2 | |
Tree-based ortholog | 1-to-1 | TC0005G03190 | 1 | ||
Anchor point | N/A | TC0005G03190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G03190 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV08G14070 VV13G04730 | 2 | |
Tree-based ortholog | 1-to-1 | VV08G14070 | 1 | ||
Anchor point | N/A | VV08G14070 VV13G04730 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G04730 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G27030 ZM08G31960 | 2 | |
Tree-based ortholog | 1-to-many | ZM08G31960 ZM03G27030 | 2 | ||
Anchor point | N/A | ZM03G27030 ZM08G31960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G31960 | 1 |