Integrative Orthology Viewer: CRU_005G19020 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_005G19020 | 1 | |
Tree-based ortholog | CRU_006G01340 CRU_003G08200 CRU_005G19020 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_005G19020 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | many-to-many | ATR_00085G00880 ATR_00012G00260 ATR_00012G00420 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00010G02570 ATR_00012G00390 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL4G23210 | 1 | |
Tree-based ortholog | many-to-many | AL6G01740 AL3G09670 | 2 | ||
Anchor point | N/A | AL5G23700 AL4G23210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G23210 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT2G37470 AT3G53650 | 2 | |
Tree-based ortholog | many-to-many | AT5G02570 AT3G09480 | 2 | ||
Anchor point | N/A | AT3G53650 AT2G37470 AT5G02570 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G37470 | 1 | ||
Beta vulgaris | Tree-based ortholog | many-to-many | BV7G06990 BV7G07010 BV7G19220 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G19220 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-many | BR04G05220 BR09G34860 | 2 | |
Tree-based ortholog | many-to-many | BR09G34860 BR04G05220 BR07G13930 | 3 | ||
Anchor point | N/A | BR07G13930 BR04G05220 BR09G34860 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR09G34860 BR04G05220 | 2 | ||
Carica papaya | Tree-based ortholog | many-to-1 | CP00163G00210 | 1 | |
Anchor point | N/A | CP00190G00160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00190G00240 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-many | CR13G06630 CR13G06520 CR06G05820 ... | 28 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR13G06520 CR13G06630 | 2 | ||
Citrullus lanatus | Tree-based ortholog | many-to-many | CL01G10570 CL02G20570 CL01G10560 ... | 5 | |
Anchor point | N/A | CL10G18890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G20570 | 1 | ||
Citrus sinensis | Tree-based ortholog | many-to-many | CS00014G00870 CS05334G00020 CS00016G00160 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00014G00820 | 1 | ||
Cucumis melo | Tree-based ortholog | many-to-many | CM00020G02400 CM00004G02070 CM00068G00340 ... | 4 | |
Anchor point | N/A | CM00011G02050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00020G02400 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0010G17890 EG0635G00020 | 2 | |
Anchor point | N/A | EG0010G17890 EG0002G33030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G33030 | 1 | ||
Fragaria vesca | Tree-based ortholog | many-to-many | FV0G31840 FV0G31800 FV0G31550 ... | 9 | |
Anchor point | N/A | FV6G13680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G31840 | 1 | ||
Glycine max | Orthologous gene family | 1-to-1 | GM10G34231 | 1 | |
Tree-based ortholog | many-to-many | GM19G35690 GM03G32980 GM13G19470 | 3 | ||
Anchor point | N/A | GM13G19470 GM11G15050 GM12G07030 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM10G34231 | 1 | ||
Gossypium raimondii | Tree-based ortholog | many-to-1 | GR02G25390 | 1 | |
Anchor point | N/A | GR09G42440 GR03G13540 GR13G26470 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G25390 | 1 | ||
Lotus japonicus | Tree-based ortholog | many-to-1 | LJ5G009530 | 1 | |
Anchor point | N/A | LJ5G009530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G044960 | 1 | ||
Malus domestica | Tree-based ortholog | many-to-1 | MD00G138540 | 1 | |
Anchor point | N/A | MD11G008290 MD12G012880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD11G008290 | 1 | ||
Manihot esculenta | Tree-based ortholog | many-to-many | ME02947G00050 ME07168G00050 ME06206G00060 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06206G00060 | 1 | ||
Medicago truncatula | Orthologous gene family | 1-to-many | MT1G090780 MT1G492910 | 2 | |
Tree-based ortholog | many-to-many | MT7G099960 MT1G068600 | 2 | ||
Anchor point | N/A | MT1G068600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT4G064020 MT4G063990 MT4G063240 ... | 5 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS01G05610 OS01G05900 OS01G05630 ... | 9 | |
Anchor point | N/A | OS03G17084 OS01G62230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G17084 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | many-to-many | OL08G01790 OL12G01030 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL12G01030 OL08G01790 | 2 | ||
Physcomitrella patens | Orthologous gene family | 1-to-many | PP00034G01470 PP00037G01110 PP00056G00950 ... | 8 | |
Tree-based ortholog | many-to-many | PP00117G00010 PP00098G01260 PP00056G00950 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00037G01110 PP00056G00950 PP00117G00010 ... | 8 | ||
Populus trichocarpa | Tree-based ortholog | many-to-many | PT09G02800 PT04G09120 PT04G09140 ... | 11 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G09140 PT04G09120 | 2 | ||
Prunus persica | Tree-based ortholog | many-to-many | PPE_006G08200 PPE_006G08050 PPE_006G08120 ... | 5 | |
Anchor point | N/A | PPE_006G25800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_006G08050 PPE_006G08200 PPE_006G08120 | 3 | ||
Ricinus communis | Tree-based ortholog | many-to-many | RC29154G00080 RC29589G00490 RC28872G00020 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28872G00030 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | many-to-many | SL06G075800 SL06G005390 SL11G007920 ... | 13 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G007920 | 1 | ||
Solanum tuberosum | Tree-based ortholog | many-to-many | ST06G031680 ST06G010190 ST11G010770 ... | 12 | |
Anchor point | N/A | ST06G031680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G031680 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G08710 | 1 | |
Tree-based ortholog | many-to-1 | TP3G07850 | 1 | ||
Anchor point | N/A | TP5G08710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G08710 | 1 | ||
Theobroma cacao | Tree-based ortholog | many-to-many | TC0009G32120 TC0009G32070 TC0010G08540 ... | 5 | |
Anchor point | N/A | TC0005G04290 TC0009G32070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G04290 | 1 | ||
Vitis vinifera | Tree-based ortholog | many-to-many | VV06G04060 VV06G04070 VV06G04050 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G04050 | 1 | ||
Zea mays | Tree-based ortholog | many-to-many | ZM02G30890 ZM07G14910 ZM09G29240 ... | 14 | |
Anchor point | N/A | ZM08G32150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G30890 | 1 |