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Integrative Orthology Viewer:
CRU_005G18890
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_004G29240 CRU_005G18890 CRU_005G28040 | 3 |  |
| Tree-based ortholog | CRU_005G18890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_005G18890 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00012G00610 | 1 | |
| Tree-based ortholog | 1-to-many | ATR_00034G00660 ATR_00057G02910 ATR_00034G00650 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00057G02910 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL4G35860 AL5G23500 AL5G33910 | 3 | |
| Tree-based ortholog | 1-to-1 | AL5G23500 | 1 | ||
| Anchor point | N/A | AL5G23500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G23500 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G47650 AT3G53520 AT3G62830 | 3 | |
| Tree-based ortholog | 1-to-1 | AT3G53520 | 1 | ||
| Anchor point | N/A | AT3G53520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G53520 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV7G16240 BV7G17200 | 2 | |
| Tree-based ortholog | 1-to-1 | BV7G16240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G16240 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G23050 BR04G00460 BR04G05330 ... | 6 | |
| Tree-based ortholog | 1-to-1 | BR09G34750 | 1 | ||
| Anchor point | N/A | BR09G34750 BR04G05330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G05330 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00009G02570 CP00114G00060 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00114G00060 | 1 | ||
| Anchor point | N/A | CP00114G00060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00114G00060 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR03G06220 | 1 | |
| Tree-based ortholog | 1-to-1 | CR03G06220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G06220 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL06G04840 CL10G09160 | 2 | |
| Tree-based ortholog | 1-to-1 | CL10G18810 | 1 | ||
| Anchor point | N/A | CL10G18800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G09160 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00001G07570 CS00016G00340 CS00227G00040 | 3 | |
| Tree-based ortholog | 1-to-1 | CS00227G00040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00227G00040 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00011G02130 CM00031G04340 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00011G02130 | 1 | ||
| Anchor point | N/A | CM00011G02130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G02130 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G09930 EG0008G09590 EG0008G31660 | 3 | |
| Tree-based ortholog | 1-to-1 | EG0001G09930 | 1 | ||
| Anchor point | N/A | EG0001G09930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G09930 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV2G28080 FV4G13390 FV6G13980 | 3 | |
| Tree-based ortholog | 1-to-1 | FV6G13980 | 1 | ||
| Anchor point | N/A | FV6G13980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G13980 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G02170 GM03G37280 GM07G37610 ... | 8 | |
| Tree-based ortholog | 1-to-many | GM10G05260 GM13G19640 | 2 | ||
| Anchor point | N/A | GM13G19640 GM10G05260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G05260 GM13G19640 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G25330 GR04G09000 GR05G06100 ... | 6 | |
| Tree-based ortholog | 1-to-many | GR02G25330 GR09G42290 | 2 | ||
| Anchor point | N/A | GR09G42290 GR02G25330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G25330 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G028270 | 1 | |
| Tree-based ortholog | 1-to-many | LJ5G009630 LJ5G028270 | 2 | ||
| Anchor point | N/A | LJ5G009630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G028270 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD03G024540 MD04G008590 MD12G012550 ... | 5 | |
| Tree-based ortholog | 1-to-many | MD12G012550 MD12G012570 MD04G008590 | 3 | ||
| Anchor point | N/A | MD12G012550 MD04G008590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD12G012550 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME04457G00740 ME06836G00050 ME08265G03730 | 3 | |
| Tree-based ortholog | 1-to-1 | ME06836G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06836G00050 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G067530 MT1G088480 MT4G120030 | 3 | |
| Tree-based ortholog | 1-to-1 | MT1G067530 | 1 | ||
| Anchor point | N/A | MT1G067530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G067530 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G21320 OS03G17230 OS05G29990 ... | 4 | |
| Tree-based ortholog | 1-to-many | OS05G29990 OS01G21320 OS07G47700 ... | 4 | ||
| Anchor point | N/A | OS01G62020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G17230 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL14G00140 | 1 | |
| Tree-based ortholog | 1-to-1 | OL14G00140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL14G00140 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00060G00530 PP00120G00110 PP00120G00120 ... | 4 | |
| Tree-based ortholog | 1-to-many | PP00120G00120 PP00120G00110 PP00209G00240 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00120G00120 PP00209G00240 PP00120G00110 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G20440 PT06G21400 PT14G12920 ... | 4 | |
| Tree-based ortholog | 1-to-many | PT06G21400 PT16G08050 | 2 | ||
| Anchor point | N/A | PT16G08050 PT06G21400 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT16G08050 PT06G21400 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G12650 PPE_006G25520 PPE_008G27370 | 3 | |
| Tree-based ortholog | 1-to-1 | PPE_006G25520 | 1 | ||
| Anchor point | N/A | PPE_006G25520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G25520 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC27917G00030 RC29585G00060 RC29876G00130 ... | 4 | |
| Tree-based ortholog | 1-to-1 | RC27917G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29986G00330 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL10G085920 SL12G099480 | 2 | |
| Tree-based ortholog | 1-to-many | SL09G075120 SL01G066700 SL12G099480 | 3 | ||
| Anchor point | N/A | SL10G085920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G085920 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST10G028840 ST12G031430 | 2 | |
| Tree-based ortholog | 1-to-1 | ST09G005770 | 1 | ||
| Anchor point | N/A | ST09G005770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G028840 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP4G29590 TP5G00680 TP5G08810 | 3 | |
| Tree-based ortholog | 1-to-1 | TP5G08810 | 1 | ||
| Anchor point | N/A | TP5G08810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G08810 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G29880 TC0004G28800 TC0005G04530 | 3 | |
| Tree-based ortholog | 1-to-1 | TC0005G04530 | 1 | ||
| Anchor point | N/A | TC0005G04530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G04530 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV05G12740 VV06G03910 VV13G05500 | 3 | |
| Tree-based ortholog | 1-to-1 | VV08G02180 | 1 | ||
| Anchor point | N/A | VV08G02180 VV13G05500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G03910 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM03G11190 ZM03G27560 ZM08G12970 ... | 5 | |
| Tree-based ortholog | 1-to-many | ZM08G12970 ZM06G22150 ZM03G11190 | 3 | ||
| Anchor point | N/A | ZM08G32230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G23540 | 1 |