Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_005G17490
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_005G17490 | 1 |  |
| Tree-based ortholog | CRU_005G17490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_005G17490 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00034G00880 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00034G00880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00034G00880 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G22010 | 1 | |
| Tree-based ortholog | 1-to-1 | AL5G22010 | 1 | ||
| Anchor point | N/A | AL5G22010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G22010 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G52260 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G52260 | 1 | ||
| Anchor point | N/A | AT3G52260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G52260 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV7G00730 | 1 | |
| Tree-based ortholog | 1-to-1 | BV7G00730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G00730 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR03G42390 | 1 | |
| Tree-based ortholog | 1-to-1 | BR03G42390 | 1 | ||
| Anchor point | N/A | BR03G42390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G42390 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00466G00100 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00466G00100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00466G00100 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR16G06130 | 1 | |
| Tree-based ortholog | 1-to-1 | CR16G06130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G06130 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL09G20940 | 1 | |
| Tree-based ortholog | 1-to-1 | CL09G20940 | 1 | ||
| Anchor point | N/A | CL09G20940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G20940 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00270G00140 | 1 | |
| Tree-based ortholog | 1-to-many | CS09973G00010 CS00270G00140 | 2 | ||
| Anchor point | N/A | CS00270G00140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00270G00140 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM01595G00240 | 1 | |
| Tree-based ortholog | 1-to-1 | CM01595G00240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM01595G00240 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0007G22200 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0007G22200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G22200 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G24230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G24230 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-1 | GM20G31860 | 1 | |
| Tree-based ortholog | 1-to-1 | GM20G31860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM20G31860 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR10G20490 | 1 | |
| Tree-based ortholog | 1-to-1 | GR10G20490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G20490 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G000270 | 1 | |
| Malus domestica | Orthologous gene family | 1-to-many | MD00G293860 MD10G003610 | 2 | |
| Tree-based ortholog | 1-to-many | MD10G003610 MD00G293860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G293860 MD10G003610 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME12004G00590 | 1 | |
| Tree-based ortholog | 1-to-1 | ME12004G00590 | 1 | ||
| Anchor point | N/A | ME12004G00590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12004G00590 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G095580 | 1 | |
| Tree-based ortholog | 1-to-1 | MT1G095580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G095580 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS03G17920 | 1 | |
| Tree-based ortholog | 1-to-1 | OS03G17920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G17920 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL15G00780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G01860 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00334G00380 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00334G00380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00334G00380 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT08G04200 | 1 | |
| Tree-based ortholog | 1-to-1 | PT08G04200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G04200 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-many | PPE_002G20850 PPE_002G20870 | 2 | |
| Tree-based ortholog | 1-to-many | PPE_002G20870 PPE_002G20850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G20850 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G03520 | 1 | |
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL02G062520 | 1 | |
| Tree-based ortholog | 1-to-1 | SL02G062520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G062520 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST02G010090 | 1 | |
| Tree-based ortholog | 1-to-1 | ST02G010090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G010090 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G10000 | 1 | |
| Tree-based ortholog | 1-to-1 | TP5G10000 | 1 | ||
| Anchor point | N/A | TP5G10000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G10000 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0010G06680 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0010G06680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G06680 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV13G03420 | 1 | |
| Tree-based ortholog | 1-to-1 | VV13G03420 | 1 | ||
| Anchor point | N/A | VV13G03420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G03420 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM01G12130 ZM01G12140 | 2 | |
| Tree-based ortholog | 1-to-many | ZM01G12130 ZM01G12140 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G12130 | 1 |