Integrative Orthology Viewer: CRU_005G10740 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_005G10740 CRU_005G17650 | 2 | |
Tree-based ortholog | CRU_005G10740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_005G10740 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00080G00480 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00080G00480 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL5G13740 AL8G26460 | 2 | |
Tree-based ortholog | 1-to-1 | AL5G13740 | 1 | ||
Anchor point | N/A | AL5G13740 AL8G26460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G13740 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G45600 | 1 | |
Tree-based ortholog | 1-to-1 | AT3G45600 | 1 | ||
Anchor point | N/A | AT5G60220 AT3G45600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G45600 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G78000 | 1 | |
Tree-based ortholog | 1-to-1 | BV0G78000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G78000 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G22340 BR03G10090 | 2 | |
Tree-based ortholog | 1-to-1 | BR01G22340 | 1 | ||
Anchor point | N/A | BR01G22340 BR03G10090 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G22340 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00318G00040 | 1 | |
Tree-based ortholog | 1-to-1 | CP00318G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00318G00040 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G21010 | 1 | |
Tree-based ortholog | 1-to-1 | CL03G02440 | 1 | ||
Anchor point | N/A | CL02G21010 CL03G02440 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G21010 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00014G01710 | 1 | |
Tree-based ortholog | 1-to-1 | CS00014G01710 | 1 | ||
Anchor point | N/A | CS00014G01710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00014G01710 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00082G00650 | 1 | |
Tree-based ortholog | 1-to-1 | CM00004G03550 | 1 | ||
Anchor point | N/A | CM00082G00650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00082G00650 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G19790 | 1 | |
Tree-based ortholog | 1-to-1 | EG0002G19790 | 1 | ||
Anchor point | N/A | EG0002G19790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G19790 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV3G29870 | 1 | |
Tree-based ortholog | 1-to-1 | FV3G29870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G29870 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM11G15790 GM12G07660 | 2 | |
Tree-based ortholog | 1-to-many | GM11G15790 GM12G07660 GM13G40390 | 3 | ||
Anchor point | N/A | GM12G07660 GM11G15790 GM13G40390 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G07660 GM11G15790 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G12110 GR09G07920 | 2 | |
Tree-based ortholog | 1-to-many | GR09G07920 GR06G12110 | 2 | ||
Anchor point | N/A | GR06G12110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G12110 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G032060 | 1 | |
Tree-based ortholog | 1-to-1 | LJ3G032060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G032060 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G097280 MD00G262740 | 2 | |
Tree-based ortholog | 1-to-many | MD00G262740 MD00G097280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G097280 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME03750G00600 | 1 | |
Tree-based ortholog | 1-to-1 | ME03750G00600 | 1 | ||
Anchor point | N/A | ME03750G00600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03750G00600 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G061010 | 1 | |
Tree-based ortholog | 1-to-1 | MT4G061010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G061010 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS05G03140 | 1 | |
Tree-based ortholog | 1-to-many | OS05G03140 OS12G14580 OS03G63600 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G03140 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00303G00250 PP00191G00450 PP00002G00130 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00022G02220 PP00191G00450 PP00002G00130 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT09G01510 | 1 | |
Tree-based ortholog | 1-to-many | PT09G01510 PT19G04520 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G01510 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_006G09160 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_006G09160 | 1 | ||
Anchor point | N/A | PPE_006G09160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G09160 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30111G00010 | 1 | |
Tree-based ortholog | 1-to-1 | RC30111G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30111G00010 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL11G072480 | 1 | |
Tree-based ortholog | 1-to-many | SL11G072480 SL06G075360 | 2 | ||
Anchor point | N/A | SL06G075360 SL11G072480 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G072480 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST11G029400 | 1 | |
Tree-based ortholog | 1-to-1 | ST11G029400 | 1 | ||
Anchor point | N/A | ST11G029400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G029400 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP5G15890 TP6G21850 | 2 | |
Tree-based ortholog | 1-to-1 | TP5G15890 | 1 | ||
Anchor point | N/A | TP6G21850 TP5G15890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G15890 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G25720 | 1 | |
Tree-based ortholog | 1-to-1 | TC0009G25720 | 1 | ||
Anchor point | N/A | TC0009G25720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G25720 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV06G04830 | 1 | |
Tree-based ortholog | 1-to-1 | VV06G04830 | 1 | ||
Anchor point | N/A | VV06G04830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G04830 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM06G03950 ZM08G20970 | 2 | |
Tree-based ortholog | 1-to-many | ZM08G20970 ZM06G03950 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G03950 ZM08G20970 | 2 |