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Integrative Orthology Viewer:
CRU_005G10680
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_002G25170 CRU_005G10680 CRU_008G10060 | 3 |  |
| Tree-based ortholog | CRU_005G10680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_005G10680 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00003G00930 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00003G00930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00003G00930 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G28850 AL8G14220 | 2 | |
| Tree-based ortholog | 1-to-1 | AL1G47240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G28850 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G80930 | 1 | |
| Tree-based ortholog | 1-to-1 | AT1G80930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G80930 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV7G07920 | 1 | |
| Tree-based ortholog | 1-to-many | BV7G07920 BV0G31180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G07920 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR02G25480 BR07G34240 | 2 | |
| Tree-based ortholog | 1-to-many | BR03G31560 BR05G32750 BR02G25480 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G25480 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00054G00440 | 1 | |
| Tree-based ortholog | 1-to-1 | CP40106G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00054G00440 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G02610 | 1 | |
| Tree-based ortholog | 1-to-1 | CR06G02610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G02610 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G23370 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G23370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G23370 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00250G00060 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00771G00040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00250G00060 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00022G04400 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00022G04400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00022G04400 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0010G06990 EG0010G09230 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0010G09230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G06990 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV3G01610 FV3G42530 | 2 | |
| Tree-based ortholog | 1-to-many | FV3G42530 FV3G42510 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G42530 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM08G41440 GM13G24660 GM16G21451 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM16G21451 GM07G31811 GM08G41440 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G14770 GM13G24660 GM08G41440 | 3 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR05G12320 | 1 | |
| Tree-based ortholog | 1-to-1 | GR05G12320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G12320 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G011330 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ2G022090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G011330 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G009830 MD00G367520 | 2 | |
| Tree-based ortholog | 1-to-many | MD15G036120 MD08G022620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD11G002530 MD00G367520 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02620G00010 ME04305G00150 | 2 | |
| Tree-based ortholog | 1-to-many | ME02620G00010 ME04305G00150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04305G00150 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT3G434840 MT7G093510 | 2 | |
| Tree-based ortholog | 1-to-many | MT3G021000 MT5G096330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G434840 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS11G05394 OS12G15420 | 2 | |
| Tree-based ortholog | 1-to-many | OS11G05394 OS12G15420 OS12G17550 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G15420 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL11G01250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G01250 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-1 | PP00073G00090 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00073G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00073G00090 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT16G12110 | 1 | |
| Tree-based ortholog | 1-to-1 | PT16G12110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT16G12110 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_006G05050 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_006G05050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G05050 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29601G00050 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29601G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29601G00050 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G116050 SL03G122110 SL04G079920 ... | 4 | |
| Tree-based ortholog | 1-to-many | SL04G079920 SL08G005190 SL03G116050 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G005190 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G029510 ST03G034830 ST04G033190 | 3 | |
| Tree-based ortholog | 1-to-many | ST04G033190 ST03G029510 ST01G042980 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G033190 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G34810 | 1 | |
| Tree-based ortholog | 1-to-many | TP3G07760 TP6G06350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G34810 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G38160 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0001G38160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G38160 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G05380 | 1 | |
| Zea mays | Tree-based ortholog | 1-to-1 | ZM10G04620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G04620 | 1 |