Integrative Orthology Viewer: CRU_005G09540 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_005G09540 | 1 | |
Anchor point | CRU_015G00220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_005G09540 | 1 | ||
Tree-based ortholog | CRU_015G00220 CRU_005G09540 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00071G01770 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00071G01770 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL5G12370 | 1 | |
Anchor point | 1-to-1 | AL5G12370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G12370 | 1 | ||
Tree-based ortholog | many-to-1 | AL5G12370 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G44590 | 1 | |
Anchor point | 1-to-1 | AT3G44590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G44590 | 1 | ||
Tree-based ortholog | many-to-1 | AT3G44590 | 1 | ||
Beta vulgaris | Anchor point | 1-to-1 | BV7G08920 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G12460 | 1 | ||
Tree-based ortholog | many-to-1 | BV7G12460 | 1 | ||
Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G23490 | 1 | |
Tree-based ortholog | many-to-many | BR03G23490 BR04G15770 BR07G12660 | 3 | ||
Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CP00031G00090 CP00031G00050 CP00031G00800 | 3 | |
Tree-based ortholog | many-to-many | CP00031G00050 CP00031G00800 CP00031G00090 ... | 4 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G12940 | 1 | |
Tree-based ortholog | many-to-1 | CR02G12940 | 1 | ||
Citrullus lanatus | Anchor point | 1-to-many | CL05G22770 CL02G22110 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G22110 | 1 | ||
Tree-based ortholog | many-to-many | CL04G09770 CL05G22770 CL02G22110 | 3 | ||
Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00056G00580 | 1 | |
Tree-based ortholog | many-to-1 | CS00056G00580 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00068G00740 | 1 | |
Anchor point | 1-to-1 | CM00047G03130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00068G00740 | 1 | ||
Tree-based ortholog | many-to-many | CM00068G00740 CM00016G07010 CM00094G00090 ... | 4 | ||
Eucalyptus grandis | Anchor point | 1-to-1 | EG0010G04060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G02930 | 1 | ||
Tree-based ortholog | many-to-many | EG0010G04060 EG0001G02930 | 2 | ||
Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G18720 | 1 | |
Tree-based ortholog | many-to-many | FV3G10860 FV4G06270 FV4G05210 ... | 8 | ||
Glycine max | Anchor point | 1-to-many | GM12G30800 GM03G35080 GM13G39490 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM03G35080 GM19G37780 | 2 | ||
Tree-based ortholog | many-to-many | GM13G39490 GM12G30800 GM19G37780 ... | 6 | ||
Gossypium raimondii | Anchor point | 1-to-many | GR09G08730 GR02G24120 GR01G12080 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR04G00890 GR04G00900 | 2 | ||
Tree-based ortholog | many-to-many | GR09G40560 GR04G00900 GR04G00890 ... | 7 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G017450 | 1 | |
Tree-based ortholog | many-to-1 | LJ3G017450 | 1 | ||
Malus domestica | Orthologous gene family | 1-to-many | MD00G143670 MD03G011070 | 2 | |
Anchor point | 1-to-1 | MD03G011070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G143670 MD03G011070 MD17G018360 | 3 | ||
Tree-based ortholog | many-to-many | MD00G081650 MD12G013800 MD00G081660 ... | 15 | ||
Manihot esculenta | Orthologous gene family | 1-to-1 | ME05859G00510 | 1 | |
Anchor point | 1-to-many | ME05859G00510 ME03569G00350 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03569G00350 | 1 | ||
Tree-based ortholog | many-to-many | ME03569G00350 ME05859G00510 | 2 | ||
Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G085085 | 1 | |
Tree-based ortholog | many-to-many | MT00G32820 MT2G085085 MT1G060600 | 3 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G37330 | 1 | |
Tree-based ortholog | many-to-many | OS01G09510 OS02G32760 OS05G37330 | 3 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL14G03080 | 1 | |
Tree-based ortholog | many-to-1 | OL14G03080 | 1 | ||
Physcomitrella patens | Orthologous gene family | 1-to-many | PP00014G01570 PP00051G01670 PP00409G00210 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00021G00730 PP00409G00210 PP00030G01300 ... | 5 | ||
Tree-based ortholog | many-to-many | PP00030G01300 PP00409G00210 PP00051G01670 ... | 5 | ||
Populus trichocarpa | Anchor point | 1-to-many | PT09G14620 PT04G18580 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G14620 | 1 | ||
Tree-based ortholog | many-to-many | PT10G23640 PT09G14620 PT04G18580 | 3 | ||
Prunus persica | Anchor point | 1-to-1 | PPE_006G12090 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G12090 | 1 | ||
Tree-based ortholog | many-to-many | PPE_006G12090 PPE_007G13700 | 2 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC29805G00860 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29805G00860 | 1 | ||
Tree-based ortholog | many-to-many | RC29791G00090 RC29805G00860 | 2 | ||
Solanum lycopersicum | Anchor point | 1-to-many | SL11G067100 SL06G074430 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G074430 | 1 | ||
Tree-based ortholog | many-to-many | SL07G007880 SL06G074430 SL11G067100 | 3 | ||
Solanum tuberosum | Orthologous gene family | 1-to-1 | ST01G016280 | 1 | |
Anchor point | 1-to-many | ST11G024920 ST06G031160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G016280 | 1 | ||
Tree-based ortholog | many-to-many | ST01G016280 ST07G006210 ST07G008610 ... | 6 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G16620 | 1 | |
Anchor point | 1-to-1 | TP5G16620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G16620 | 1 | ||
Tree-based ortholog | many-to-1 | TP5G16620 | 1 | ||
Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G08140 | 1 | |
Tree-based ortholog | many-to-many | TC0004G13970 TC0009G28320 TC0009G28330 ... | 4 | ||
Vitis vinifera | Orthologous gene family | 1-to-1 | VV10G07090 | 1 | |
Anchor point | 1-to-1 | VV06G08060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G07090 | 1 | ||
Tree-based ortholog | many-to-many | VV13G12080 VV10G07090 VV06G08060 ... | 4 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G14730 | 1 | |
Tree-based ortholog | many-to-many | ZM08G11170 ZM08G11140 ZM08G11150 ... | 6 |