Integrative Orthology Viewer: CRU_005G00090 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_001G35840 CRU_002G06240 CRU_002G06250 ... | 6 | |
Tree-based ortholog | CRU_005G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_005G00090 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00004G00980 ATR_00006G00780 ATR_00025G03340 | 3 | |
Tree-based ortholog | 1-to-1 | ATR_00006G00780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00006G00780 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G42330 AL2G07290 AL2G07320 ... | 6 | |
Tree-based ortholog | 1-to-1 | AL5G00090 | 1 | ||
Anchor point | N/A | AL5G00090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL5G00090 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G48650 AT1G58050 AT1G58060 ... | 6 | |
Tree-based ortholog | 1-to-1 | AT2G01130 | 1 | ||
Anchor point | N/A | AT2G01130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G01130 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G20990 BV0G21010 BV0G32780 ... | 6 | |
Tree-based ortholog | 1-to-1 | BV6G19060 | 1 | ||
Anchor point | N/A | BV6G19060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G19060 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G17750 BR06G04020 BR06G35790 ... | 5 | |
Tree-based ortholog | 1-to-1 | BR06G35790 | 1 | ||
Anchor point | N/A | BR06G35790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G35790 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00003G04450 CP00054G00410 CP00054G00420 ... | 5 | |
Tree-based ortholog | 1-to-1 | CP00065G00850 | 1 | ||
Anchor point | N/A | CP00065G00850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00065G00850 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR03G06720 CR06G04020 CR12G01000 | 3 | |
Tree-based ortholog | 1-to-many | CR03G06720 CR06G04020 CR12G01000 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G01000 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL05G10640 CL05G23200 CL05G23440 ... | 5 | |
Tree-based ortholog | 1-to-1 | CL05G23440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G23440 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00008G00010 CS00018G01120 CS00044G00060 ... | 5 | |
Tree-based ortholog | 1-to-1 | CS00008G00010 | 1 | ||
Anchor point | N/A | CS00008G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00044G00060 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00011G04780 CM00016G06230 CM00016G06500 ... | 4 | |
Tree-based ortholog | 1-to-1 | CM00016G06230 | 1 | ||
Anchor point | N/A | CM00016G06230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G06230 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G07010 EG0007G02100 EG0007G16970 ... | 5 | |
Tree-based ortholog | 1-to-1 | EG0007G16970 | 1 | ||
Anchor point | N/A | EG0007G16970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G16970 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G00660 FV5G17190 FV5G26090 ... | 6 | |
Tree-based ortholog | 1-to-1 | FV0G00660 | 1 | ||
Anchor point | N/A | FV0G00660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G00660 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G35240 GM05G34180 GM08G05480 ... | 10 | |
Tree-based ortholog | 1-to-many | GM20G25800 GM09G18490 | 2 | ||
Anchor point | N/A | GM20G25800 GM05G34180 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM20G25800 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G21600 GR05G19460 GR07G00630 ... | 5 | |
Tree-based ortholog | 1-to-1 | GR05G19460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G19460 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G050860 | 1 | |
Tree-based ortholog | 1-to-1 | LJ4G050860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G050860 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD12G003650 | 1 | |
Tree-based ortholog | 1-to-1 | MD12G003650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD12G003650 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02538G00120 ME02892G00680 ME03264G00340 ... | 5 | |
Tree-based ortholog | 1-to-1 | ME03264G00340 | 1 | ||
Anchor point | N/A | ME03264G00340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03264G00340 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G056490 MT1G109170 MT4G134790 ... | 6 | |
Tree-based ortholog | 1-to-1 | MT1G109170 | 1 | ||
Anchor point | N/A | MT1G109170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G109170 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G02884 OS03G53760 OS04G35260 ... | 4 | |
Tree-based ortholog | 1-to-1 | OS01G02884 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G53760 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL02G06210 OL02G06230 OL03G04700 ... | 5 | |
Tree-based ortholog | 1-to-1 | OL02G00690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G01920 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00011G00110 PP00036G01040 PP00304G00220 ... | 4 | |
Tree-based ortholog | 1-to-1 | PP00304G00220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00304G00220 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G22290 PT08G01410 PT10G11780 ... | 6 | |
Tree-based ortholog | 1-to-1 | PT10G11780 | 1 | ||
Anchor point | N/A | PT10G11780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G11780 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G32900 PPE_001G53870 PPE_002G05920 ... | 5 | |
Tree-based ortholog | 1-to-1 | PPE_001G32900 | 1 | ||
Anchor point | N/A | PPE_005G22920 PPE_001G32900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G32900 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29333G00140 RC29660G00310 RC29852G00340 ... | 5 | |
Tree-based ortholog | 1-to-1 | RC29660G00310 | 1 | ||
Anchor point | N/A | RC30076G01800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29660G00310 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G006710 SL01G006970 SL01G103690 ... | 5 | |
Tree-based ortholog | 1-to-1 | SL04G007510 | 1 | ||
Anchor point | N/A | SL04G007510 SL03G118920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G007510 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G007270 ST01G007550 ST01G040670 ... | 5 | |
Tree-based ortholog | 1-to-1 | ST04G006230 | 1 | ||
Anchor point | N/A | ST04G006230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G006230 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G35630 TP2G05520 TP2G05550 ... | 6 | |
Tree-based ortholog | 1-to-1 | TP2G12600 | 1 | ||
Anchor point | N/A | TP2G12600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G12600 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G02260 TC0002G21170 TC0003G04420 ... | 5 | |
Tree-based ortholog | 1-to-1 | TC0002G21170 | 1 | ||
Anchor point | N/A | TC0002G27550 TC0003G04420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G21170 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G07050 VV08G01560 VV12G07280 ... | 5 | |
Tree-based ortholog | 1-to-1 | VV01G07050 | 1 | ||
Anchor point | N/A | VV01G07050 VV17G06620 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G07050 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G42370 ZM02G14980 ZM03G06690 | 3 | |
Tree-based ortholog | 1-to-1 | ZM03G06690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G06690 | 1 |