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Integrative Orthology Viewer:
CRU_004G28850
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_001G02250 CRU_001G23540 CRU_004G28850 | 3 |  |
| Tree-based ortholog | CRU_004G28850 | 1 | ||
| Anchor point | CRU_005G27600 CRU_003G05750 CRU_001G08250 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_004G28850 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00005G00390 ATR_00097G00020 ATR_00006G02050 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00005G00390 ATR_00097G00020 ATR_00006G02050 | 3 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G02620 AL1G27100 AL4G35440 | 3 | |
| Tree-based ortholog | 1-to-1 | AL4G35440 | 1 | ||
| Anchor point | many-to-many | AL4G35400 AL3G06730 AL1G08990 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G35440 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G26540 | 1 | |
| Tree-based ortholog | 1-to-1 | AT2G47230 | 1 | ||
| Anchor point | many-to-many | AT3G62300 AT3G06520 AT1G09320 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G47230 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV5G15780 | 1 | |
| Anchor point | many-to-1 | BV5G15780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G15780 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-1 | BR01G40290 | 1 | |
| Tree-based ortholog | 1-to-many | BR01G40290 BR01G40280 BR02G34300 | 3 | ||
| Anchor point | many-to-many | BR09G41360 BR04G00580 BR07G17370 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G40290 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP31482G00010 | 1 | |
| Anchor point | many-to-1 | CP00018G00910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP32331G00010 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL09G04580 | 1 | |
| Anchor point | many-to-1 | CL09G04570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G04580 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-many | CS08878G00010 CS00036G00790 | 2 | |
| Anchor point | many-to-many | CS00004G04680 CS00001G06240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G06240 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00026G02290 | 1 | |
| Anchor point | many-to-1 | CM00026G02290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00026G02290 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0008G32970 EG0005G14220 EG0017G00140 ... | 5 | |
| Anchor point | many-to-1 | EG0008G07810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G07810 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV7G25320 FV7G31740 FV7G31730 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G27350 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM09G03740 GM10G28671 GM20G22810 | 3 | |
| Anchor point | many-to-many | GM20G22810 GM10G28671 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM20G22810 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR04G14520 | 1 | |
| Anchor point | many-to-1 | GR04G14520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G14520 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ5G026110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | LJ2G009760 LJ2G009690 | 2 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD17G021790 | 1 | |
| Anchor point | many-to-many | MD12G020990 MD04G015580 MD17G021790 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD07G015980 MD00G286810 MD00G286780 ... | 5 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME07571G00950 | 1 | |
| Anchor point | many-to-many | ME02264G01080 ME07571G00950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07571G00950 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT2G033390 MT1G084210 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G033390 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS11G35060 | 1 | |
| Anchor point | many-to-1 | OS05G04180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS11G35050 OS11G35060 | 2 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00094G00430 | 1 | |
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT02G19230 PT14G11780 PT01G16350 | 3 | |
| Anchor point | many-to-many | PT13G00690 PT02G19230 PT14G11780 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G11780 PT02G19230 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_010G00690 | 1 | |
| Anchor point | many-to-many | PPE_006G31580 PPE_010G00680 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_002G05290 PPE_002G25800 | 2 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC30128G04410 RC29836G00350 RC30076G01780 | 3 | |
| Anchor point | many-to-many | RC29889G01100 RC30128G03210 RC30076G01770 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | RC30208G00060 RC30128G04410 RC30208G00050 ... | 4 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL01G079230 | 1 | |
| Anchor point | many-to-many | SL01G079230 SL01G100780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G079230 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST01G023500 | 1 | |
| Anchor point | many-to-many | ST01G023500 ST01G038580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G023500 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP3G05300 | 1 | |
| Anchor point | many-to-many | TP5G01090 TP1G07930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G05300 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0001G31670 | 1 | |
| Anchor point | many-to-many | TC0005G32270 TC0001G31670 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G31670 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV07G09570 | 1 | |
| Anchor point | many-to-many | VV07G09570 VV14G09820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G09570 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM03G40320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G20640 | 1 |