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Integrative Orthology Viewer:
CRU_004G22470
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_001G03220 CRU_003G22390 CRU_004G22470 | 3 |  |
| Tree-based ortholog | CRU_004G22470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_004G22470 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00032G00330 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00032G00330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00032G00330 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G03640 AL3G04230 AL4G27880 | 3 | |
| Tree-based ortholog | 1-to-1 | AL4G27880 | 1 | ||
| Anchor point | N/A | AL4G27880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G27880 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G04310 AT2G40940 AT3G23150 | 3 | |
| Tree-based ortholog | 1-to-1 | AT2G40940 | 1 | ||
| Anchor point | N/A | AT2G40940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G40940 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G19580 BV3G06950 | 2 | |
| Tree-based ortholog | 1-to-1 | BV7G12240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G19580 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G28110 BR05G00410 BR08G31410 ... | 4 | |
| Tree-based ortholog | 1-to-1 | BR05G00410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G00410 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00151G00350 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00151G00350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00151G00350 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR13G02200 CR02G01610 | 2 | |
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G04940 | 1 | |
| Tree-based ortholog | 1-to-many | CL11G05300 CL09G05120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G05300 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00001G07140 CS00566G00070 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00206G00110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G07140 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00006G05530 CM00026G02850 | 2 | |
| Tree-based ortholog | 1-to-many | CM00003G00040 CM00026G02850 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00026G02850 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0008G25500 EG0010G18060 EG0011G29780 | 3 | |
| Tree-based ortholog | 1-to-1 | EG0010G18060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G29780 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV1G24610 FV2G28480 | 2 | |
| Tree-based ortholog | 1-to-1 | FV1G19490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G19490 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G37470 GM10G33240 GM19G40090 ... | 5 | |
| Tree-based ortholog | 1-to-1 | GM19G40090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM19G40090 GM03G37470 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G04790 GR06G24780 GR07G12630 ... | 4 | |
| Tree-based ortholog | 1-to-many | GR08G14310 GR07G12630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G14310 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G071050 LJ5G023790 LJ6G000550 | 3 | |
| Tree-based ortholog | 1-to-many | LJ3G005870 LJ1G071050 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G071050 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G009920 MD00G272930 MD00G332460 ... | 9 | |
| Tree-based ortholog | 1-to-many | MD15G020440 MD00G392430 MD00G009920 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G132810 MD00G332460 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME01551G01270 ME03802G00390 ME04457G00400 ... | 4 | |
| Tree-based ortholog | 1-to-many | ME00271G00050 ME12004G00790 ME04457G00400 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04457G00400 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G044210 MT1G073840 MT7G109150 | 3 | |
| Tree-based ortholog | 1-to-many | MT4G031150 MT7G109150 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G109150 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G57530 OS03G49500 OS05G06320 ... | 4 | |
| Tree-based ortholog | 1-to-1 | OS03G49500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G49500 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL09G02040 | 1 | |
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00001G01460 PP00015G00830 PP00021G02000 ... | 8 | |
| Tree-based ortholog | 1-to-many | PP00176G00570 PP00001G01460 PP00145G00850 ... | 9 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00176G00570 PP00054G01770 PP00015G00830 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G20150 PT08G16440 PT10G07430 | 3 | |
| Tree-based ortholog | 1-to-many | PT03G03230 PT01G20420 PT02G20150 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G20150 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G03310 PPE_008G27730 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_001G55910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G27730 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29603G00260 RC29680G00140 RC29986G00760 | 3 | |
| Tree-based ortholog | 1-to-many | RC28802G00070 RC29986G00760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29986G00760 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G053710 SL09G075440 SL09G089610 | 3 | |
| Tree-based ortholog | 1-to-many | SL12G011330 SL07G056580 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G075440 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST06G017120 ST09G022980 ST09G026410 | 3 | |
| Tree-based ortholog | 1-to-many | ST12G006350 ST07G025670 ST03G035240 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G022980 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP3G20800 TP4G29460 | 2 | |
| Tree-based ortholog | 1-to-1 | TP4G29460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G29460 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G30440 TC0004G25190 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0001G30440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G30440 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV05G07600 VV07G08720 VV14G14790 ... | 4 | |
| Tree-based ortholog | 1-to-1 | VV19G11980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G08720 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G49860 ZM02G20520 ZM04G24880 ... | 7 | |
| Tree-based ortholog | 1-to-many | ZM01G49860 ZM05G05940 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G05940 ZM01G49860 | 2 |