Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_003G28270
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_003G28270 | 1 |  |
| Tree-based ortholog | CRU_003G28270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_003G28270 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00038G01360 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00038G01360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00038G01360 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-many | AL3G35000 AL3G35010 | 2 | |
| Tree-based ortholog | 1-to-many | AL3G35010 AL3G35000 | 2 | ||
| Anchor point | N/A | AL3G35000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G35010 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT2G15400 AT2G15430 | 2 | |
| Tree-based ortholog | 1-to-1 | AT2G15430 | 1 | ||
| Anchor point | N/A | AT2G15400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G15430 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV9G19980 | 1 | |
| Tree-based ortholog | 1-to-1 | BV3G05840 | 1 | ||
| Anchor point | N/A | BV9G19980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G19980 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR00G02080 BR10G04320 | 2 | |
| Tree-based ortholog | 1-to-many | BR00G02080 BR10G04320 | 2 | ||
| Anchor point | N/A | BR00G02080 BR10G04320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G04320 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00012G01290 | 1 | |
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR10G00540 | 1 | |
| Tree-based ortholog | 1-to-1 | CR10G00540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR10G00540 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL11G00180 | 1 | |
| Tree-based ortholog | 1-to-1 | CL11G00180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G00180 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00065G00560 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00065G00560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00065G00560 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00009G00850 | 1 | |
| Tree-based ortholog | 1-to-many | CM00009G00850 CM00009G00860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00009G00850 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0007G10020 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0007G10020 | 1 | ||
| Anchor point | N/A | EG0007G10020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G10020 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G38450 | 1 | |
| Tree-based ortholog | 1-to-1 | FV6G38450 | 1 | ||
| Anchor point | N/A | FV6G38450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G38450 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM07G34610 GM20G02360 | 2 | |
| Tree-based ortholog | 1-to-many | GM20G02360 GM07G34610 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G34610 GM20G02360 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR08G02350 GR12G14920 | 2 | |
| Tree-based ortholog | 1-to-many | GR12G14920 GR08G02350 | 2 | ||
| Anchor point | N/A | GR08G02350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G02350 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ4G013510 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ4G013510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G013510 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD00G026940 MD05G023160 | 2 | |
| Tree-based ortholog | 1-to-many | MD05G023160 MD00G026940 MD03G012000 ... | 7 | ||
| Anchor point | N/A | MD05G023160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G026940 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME07218G00030 | 1 | |
| Tree-based ortholog | 1-to-many | ME07218G00030 ME07218G00040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07218G00030 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT4G084150 | 1 | |
| Tree-based ortholog | 1-to-1 | MT4G084150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G084150 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS09G02284 | 1 | |
| Tree-based ortholog | 1-to-1 | OS09G02284 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G02284 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-many | OL02G04480 OL02G04490 | 2 | |
| Tree-based ortholog | 1-to-many | OL02G04480 OL02G04490 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL02G04490 OL02G04480 | 2 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00079G00390 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00093G00330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00079G00390 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT09G09760 | 1 | |
| Tree-based ortholog | 1-to-1 | PT09G09760 | 1 | ||
| Anchor point | N/A | PT09G09760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G09760 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-many | PPE_008G15110 PPE_008G15160 | 2 | |
| Tree-based ortholog | 1-to-many | PPE_008G15140 PPE_008G15160 PPE_008G15110 | 3 | ||
| Anchor point | N/A | PPE_008G15110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G15110 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29801G00630 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29801G00630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29801G00630 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL05G010300 | 1 | |
| Tree-based ortholog | 1-to-1 | SL05G010300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G010300 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST05G006840 | 1 | |
| Tree-based ortholog | 1-to-1 | ST05G006840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G006840 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G28700 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G28700 | 1 | ||
| Anchor point | N/A | TP3G28700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G28700 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0002G10210 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0002G10210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G10210 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV03G00640 | 1 | |
| Tree-based ortholog | 1-to-1 | VV03G00640 | 1 | ||
| Anchor point | N/A | VV03G00640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G00640 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM02G27180 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM02G27180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G27180 | 1 |