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Integrative Orthology Viewer:
CRU_003G22390
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_001G03220 CRU_003G22390 CRU_004G22470 | 3 |  |
| Tree-based ortholog | CRU_003G22390 | 1 | ||
| Anchor point | CRU_001G03220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_003G22390 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00032G00330 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00009G01210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00009G01210 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G03640 AL3G04230 AL4G27880 | 3 | |
| Tree-based ortholog | 1-to-1 | AL1G03640 | 1 | ||
| Anchor point | 1-to-1 | AL1G03640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G04230 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G04310 AT2G40940 AT3G23150 | 3 | |
| Tree-based ortholog | 1-to-1 | AT3G23150 | 1 | ||
| Anchor point | 1-to-1 | AT3G23150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G23150 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV0G19580 BV3G06950 | 2 | |
| Tree-based ortholog | 1-to-many | BV3G06950 BV0G42220 | 2 | ||
| Anchor point | 1-to-1 | BV3G06950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G06950 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G28110 BR05G00410 BR08G31410 ... | 4 | |
| Tree-based ortholog | 1-to-1 | BR01G28110 | 1 | ||
| Anchor point | 1-to-1 | BR01G28110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G28110 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00151G00350 | 1 | |
| Tree-based ortholog | 1-to-many | CP02388G00020 CP00044G00930 | 2 | ||
| Anchor point | 1-to-1 | CP00044G00930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP02388G00020 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G04940 | 1 | |
| Tree-based ortholog | 1-to-1 | CL05G04940 | 1 | ||
| Anchor point | 1-to-1 | CL05G04940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G04940 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00001G07140 CS00566G00070 | 2 | |
| Tree-based ortholog | 1-to-many | CS00222G00130 CS00566G00070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00222G00130 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00006G05530 CM00026G02850 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00006G05530 | 1 | ||
| Anchor point | 1-to-1 | CM00006G05530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G05530 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0008G25500 EG0010G18060 EG0011G29780 | 3 | |
| Tree-based ortholog | 1-to-many | EG0008G25500 EG0008G34540 | 2 | ||
| Anchor point | 1-to-1 | EG0008G25500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G25500 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV1G24610 FV2G28480 | 2 | |
| Tree-based ortholog | 1-to-many | FV1G24610 FV0G26030 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G24610 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G37470 GM10G33240 GM19G40090 ... | 5 | |
| Tree-based ortholog | 1-to-many | GM19G43840 GM03G41220 GM10G31040 ... | 9 | ||
| Anchor point | 1-to-many | GM20G34420 GM10G01150 GM10G33240 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G34420 GM10G33240 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G04790 GR06G24780 GR07G12630 ... | 4 | |
| Tree-based ortholog | 1-to-many | GR05G04790 GR06G24780 GR07G28010 | 3 | ||
| Anchor point | 1-to-many | GR06G24780 GR05G04790 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G24780 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G071050 LJ5G023790 LJ6G000550 | 3 | |
| Tree-based ortholog | 1-to-many | LJ5G023800 LJ1G073520 LJ6G000550 ... | 4 | ||
| Anchor point | 1-to-1 | LJ6G000550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G000550 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G009920 MD00G272930 MD00G332460 ... | 9 | |
| Tree-based ortholog | 1-to-many | MD07G010770 MD05G019250 MD00G272930 ... | 8 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G446520 MD05G019250 MD00G272930 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME01551G01270 ME03802G00390 ME04457G00400 ... | 4 | |
| Tree-based ortholog | 1-to-many | ME10563G00900 ME01551G01270 ME03802G00390 ... | 4 | ||
| Anchor point | 1-to-many | ME10563G00900 ME03802G00390 ME01551G01270 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME10563G00900 ME01551G01270 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G044210 MT1G073840 MT7G109150 | 3 | |
| Tree-based ortholog | 1-to-1 | MT1G044210 | 1 | ||
| Anchor point | 1-to-1 | MT1G073840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G073840 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G57530 OS03G49500 OS05G06320 ... | 4 | |
| Tree-based ortholog | 1-to-1 | OS02G57530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G08740 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00001G01460 PP00015G00830 PP00021G02000 ... | 8 | |
| Tree-based ortholog | 1-to-many | PP00145G00850 PP00021G02000 PP02860G00020 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00115G00370 PP00115G00380 PP00176G00570 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G20150 PT08G16440 PT10G07430 | 3 | |
| Tree-based ortholog | 1-to-many | PT08G16440 PT10G07430 PT00G05870 ... | 5 | ||
| Anchor point | 1-to-many | PT10G07430 PT08G16440 PT13G04410 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G07430 PT08G16440 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G03310 PPE_008G27730 | 2 | |
| Tree-based ortholog | 1-to-many | PPE_001G03310 PPE_006G35170 | 2 | ||
| Anchor point | 1-to-many | PPE_001G03310 PPE_006G35170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G03310 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29603G00260 RC29680G00140 RC29986G00760 | 3 | |
| Tree-based ortholog | 1-to-many | RC29603G00260 RC29680G00140 | 2 | ||
| Anchor point | 1-to-1 | RC29603G00260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29603G00260 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G053710 SL09G075440 SL09G089610 | 3 | |
| Tree-based ortholog | 1-to-many | SL09G089610 SL09G082910 SL12G044870 ... | 11 | ||
| Anchor point | 1-to-many | SL09G089610 SL06G053710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G053710 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST06G017120 ST09G022980 ST09G026410 | 3 | |
| Tree-based ortholog | 1-to-many | ST09G026410 ST05G028140 ST11G005240 ... | 4 | ||
| Anchor point | 1-to-many | ST09G026410 ST06G017120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G017120 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP3G20800 TP4G29460 | 2 | |
| Tree-based ortholog | 1-to-1 | TP3G20800 | 1 | ||
| Anchor point | 1-to-1 | TP3G20800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G20800 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G30440 TC0004G25190 | 2 | |
| Tree-based ortholog | 1-to-many | TC0004G25190 TC0005G27520 | 2 | ||
| Anchor point | 1-to-1 | TC0004G25190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G25190 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV05G07600 VV07G08720 VV14G14790 ... | 4 | |
| Tree-based ortholog | 1-to-many | VV06G03070 VV14G14790 VV05G07600 | 3 | ||
| Anchor point | 1-to-1 | VV05G07600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G07600 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G49860 ZM02G20520 ZM04G24880 ... | 7 | |
| Tree-based ortholog | 1-to-1 | ZM04G24880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G24880 | 1 |