Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_003G09780
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_003G09780 | 1 |  |
| Tree-based ortholog | CRU_003G09780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_003G09780 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00007G02140 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00007G02140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00007G02140 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G11350 | 1 | |
| Tree-based ortholog | 1-to-1 | AL3G11350 | 1 | ||
| Anchor point | N/A | AL3G11350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G11350 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G10940 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G10940 | 1 | ||
| Anchor point | N/A | AT3G10940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G10940 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV2G10350 | 1 | |
| Tree-based ortholog | 1-to-1 | BV2G10350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G10350 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR05G31580 | 1 | |
| Tree-based ortholog | 1-to-1 | BR05G31580 | 1 | ||
| Anchor point | N/A | BR05G31580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G31580 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00019G00870 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00019G00870 | 1 | ||
| Anchor point | N/A | CP00019G00870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G00870 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR09G01100 | 1 | |
| Tree-based ortholog | 1-to-1 | CR09G01100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G01100 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL07G04780 | 1 | |
| Tree-based ortholog | 1-to-1 | CL07G04780 | 1 | ||
| Anchor point | N/A | CL07G04780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G04780 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00442G00120 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00442G00120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00442G00120 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00041G00890 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00041G00890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00041G00890 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0010G01180 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0010G01180 | 1 | ||
| Anchor point | N/A | EG0010G01180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G01180 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G30850 | 1 | |
| Tree-based ortholog | 1-to-1 | FV7G30850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G30850 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM04G39890 GM06G15000 | 2 | |
| Tree-based ortholog | 1-to-many | GM06G15000 GM04G39890 | 2 | ||
| Anchor point | N/A | GM04G39890 GM06G15000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G15000 GM04G39890 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR09G29430 | 1 | |
| Tree-based ortholog | 1-to-1 | GR09G29430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G29430 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G016960 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G016960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G016960 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD01G015540 | 1 | |
| Tree-based ortholog | 1-to-1 | MD01G015540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD01G015540 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME10689G00060 | 1 | |
| Tree-based ortholog | 1-to-1 | ME10689G00060 | 1 | ||
| Anchor point | N/A | ME10689G00060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME10689G00060 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT3G094300 | 1 | |
| Tree-based ortholog | 1-to-1 | MT3G094300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G094300 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-many | OS11G02180 OS12G02120 | 2 | |
| Tree-based ortholog | 1-to-many | OS12G02120 OS11G02180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS11G02180 OS12G02120 | 2 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-many | OL02G00860 OL02G00870 | 2 | |
| Tree-based ortholog | 1-to-many | OL02G00870 OL02G00860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL02G00870 OL02G00860 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00031G00010 PP00130G00410 PP00144G00150 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00014G00940 PP00144G00150 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT19G04860 | 1 | |
| Tree-based ortholog | 1-to-1 | PT19G04860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT19G04860 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G25130 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_002G25130 | 1 | ||
| Anchor point | N/A | PPE_002G25130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G25130 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29729G00770 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29729G00770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29729G00770 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL06G050230 | 1 | |
| Tree-based ortholog | 1-to-1 | SL06G050230 | 1 | ||
| Anchor point | N/A | SL06G050230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G050230 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST06G009920 | 1 | |
| Tree-based ortholog | 1-to-1 | ST06G009920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G009920 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G09270 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G09270 | 1 | ||
| Anchor point | N/A | TP3G09270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G09270 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0010G17450 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0010G17450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G17450 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV13G09510 | 1 | |
| Tree-based ortholog | 1-to-1 | VV13G09510 | 1 | ||
| Anchor point | N/A | VV13G09510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G09510 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM03G41540 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM03G41540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G41540 | 1 |