Integrative Orthology Viewer: CRU_003G07940 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_003G07940 CRU_003G10090 CRU_004G21430 | 3 | |
Tree-based ortholog | CRU_003G07940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_003G07940 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00029G03680 | 1 | |
Tree-based ortholog | 1-to-many | ATR_00148G00340 ATR_00029G03680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G03680 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G09360 AL4G26680 | 2 | |
Tree-based ortholog | 1-to-many | AL3G09360 AL3G11660 | 2 | ||
Anchor point | N/A | AL3G09360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G09360 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G40010 AT3G09200 | 2 | |
Tree-based ortholog | 1-to-many | AT3G09200 AT3G11250 | 2 | ||
Anchor point | N/A | AT3G09200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G11250 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV2G04580 | 1 | |
Tree-based ortholog | 1-to-1 | BV7G05220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G04580 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G39090 BR03G20070 BR03G31700 ... | 4 | |
Tree-based ortholog | 1-to-many | BR05G32860 BR01G39090 BR03G31700 | 3 | ||
Anchor point | N/A | BR03G31700 BR01G39090 BR05G32860 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR05G32860 BR03G31700 BR01G39090 | 3 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00019G02040 | 1 | |
Tree-based ortholog | 1-to-1 | CP00019G02040 | 1 | ||
Anchor point | N/A | CP00019G02040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00019G02040 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G08090 | 1 | |
Tree-based ortholog | 1-to-1 | CR12G08090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G08090 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL07G04030 | 1 | |
Tree-based ortholog | 1-to-1 | CL07G04030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G04030 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00021G00850 | 1 | |
Tree-based ortholog | 1-to-1 | CS00021G00850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G00850 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00075G00410 | 1 | |
Tree-based ortholog | 1-to-1 | CM00075G00410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00075G00410 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0007G24190 | 1 | |
Tree-based ortholog | 1-to-1 | EG0007G24190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G24190 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV1G07680 FV7G29100 FV7G29590 | 3 | |
Tree-based ortholog | 1-to-many | FV4G01320 FV7G29590 FV7G29100 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV7G29100 FV7G29590 FV1G07680 | 3 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G42260 GM14G06630 GM18G03300 | 3 | |
Tree-based ortholog | 1-to-many | GM11G35060 GM18G03300 GM18G03290 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G03300 GM11G35060 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR11G28370 GR12G07600 GR13G01900 | 3 | |
Tree-based ortholog | 1-to-many | GR11G28370 GR12G07600 GR13G01900 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR13G01900 GR11G28370 GR12G07600 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G042090 | 1 | |
Tree-based ortholog | 1-to-many | LJ2G042080 LJ2G041960 LJ4G026430 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G042090 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G187460 MD00G247310 MD14G016990 | 3 | |
Tree-based ortholog | 1-to-many | MD04G000090 MD00G386870 MD00G247310 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G247310 MD14G016990 MD00G187460 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME12439G00050 | 1 | |
Tree-based ortholog | 1-to-many | ME12439G00050 ME08265G03060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME08265G03060 ME12439G00050 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G108280 MT5G082180 | 2 | |
Tree-based ortholog | 1-to-many | MT3G108280 MT1G044130 MT5G082180 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT3G108280 MT5G082180 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS08G03640 OS11G04070 OS12G03880 | 3 | |
Tree-based ortholog | 1-to-many | OS11G04070 OS12G03880 OS08G03640 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS11G04070 OS12G03880 OS08G03640 | 3 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL20G00110 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G00110 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00038G00850 PP00039G01840 | 2 | |
Tree-based ortholog | 1-to-many | PP00039G01840 PP00038G00850 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00038G00850 PP00039G01840 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G06620 PT08G06630 PT10G19120 | 3 | |
Tree-based ortholog | 1-to-many | PT08G06620 PT08G06630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G19120 PT08G06620 PT08G06630 | 3 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G16570 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_001G16570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G16570 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29681G00280 | 1 | |
Tree-based ortholog | 1-to-1 | RC29669G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29669G00240 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL05G054580 SL09G091520 | 2 | |
Tree-based ortholog | 1-to-many | SL06G076870 SL09G091520 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G091520 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST05G027590 ST09G027880 | 2 | |
Tree-based ortholog | 1-to-1 | ST02G005360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G027880 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G07580 TP4G22320 | 2 | |
Tree-based ortholog | 1-to-1 | TP3G07580 | 1 | ||
Anchor point | N/A | TP3G07580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G07580 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0010G02190 | 1 | |
Tree-based ortholog | 1-to-1 | TC0010G02190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G02190 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV13G03450 VV13G10750 | 2 | |
Tree-based ortholog | 1-to-many | VV13G10750 VV13G03450 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV13G03450 VV13G10750 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM04G08100 ZM06G01850 | 2 | |
Tree-based ortholog | 1-to-many | ZM06G01850 ZM04G08100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G08100 ZM06G01850 | 2 |