Integrative Orthology Viewer: CRU_003G07700 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_003G07700 CRU_004G21540 | 2 | |
Tree-based ortholog | CRU_003G07700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_003G07700 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00029G04050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00029G04050 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL4G26780 | 1 | |
Tree-based ortholog | 1-to-1 | AL3G09030 | 1 | ||
Anchor point | N/A | AL3G09030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G09030 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G40100 | 1 | |
Tree-based ortholog | 1-to-1 | AT3G08940 | 1 | ||
Anchor point | N/A | AT3G08940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G08940 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G22880 | 1 | |
Tree-based ortholog | 1-to-1 | BV2G12680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G12680 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR05G05780 | 1 | |
Tree-based ortholog | 1-to-1 | BR05G33050 | 1 | ||
Anchor point | N/A | BR02G02610 BR05G33050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G33050 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00019G01820 | 1 | |
Tree-based ortholog | 1-to-1 | CP00163G00200 | 1 | ||
Anchor point | N/A | CP00163G00200 CP00019G01820 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00163G00200 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR17G05370 | 1 | |
Tree-based ortholog | 1-to-1 | CR17G05370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR17G05370 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G19950 | 1 | |
Tree-based ortholog | 1-to-many | CL04G07140 CL10G19950 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G07140 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00021G00690 | 1 | |
Tree-based ortholog | 1-to-1 | CS00021G00690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00021G00690 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00002G01830 | 1 | |
Anchor point | N/A | CM00002G01830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00002G01830 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0007G24350 | 1 | |
Tree-based ortholog | 1-to-1 | EG0011G25090 | 1 | ||
Anchor point | N/A | EG0011G25090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G25090 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G29360 | 1 | |
Tree-based ortholog | 1-to-1 | FV6G10570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G10570 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM11G35130 GM18G03220 | 2 | |
Tree-based ortholog | 1-to-many | GM01G28810 GM03G08280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM01G28810 GM03G08280 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR11G28590 | 1 | |
Tree-based ortholog | 1-to-1 | GR02G26390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G26390 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G005750 | 1 | |
Tree-based ortholog | 1-to-1 | LJ6G029020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G005750 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD01G014610 | 1 | |
Tree-based ortholog | 1-to-many | MD12G017370 MD04G012240 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD12G017370 MD04G012240 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME08265G03150 | 1 | |
Tree-based ortholog | 1-to-1 | ME09086G00080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09086G00080 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT3G070340 | 1 | |
Tree-based ortholog | 1-to-1 | MT4G015570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G015570 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS07G37240 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G37240 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL15G02140 | 1 | |
Tree-based ortholog | 1-to-1 | OL15G02140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL15G02140 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00155G00170 PP00155G00180 PP00472G00050 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00155G00180 PP00472G00060 PP00155G00170 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT08G06730 | 1 | |
Tree-based ortholog | 1-to-many | PT06G09950 PT16G11520 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT16G11520 PT06G09950 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G23920 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_002G23920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G23920 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29669G00520 | 1 | |
Tree-based ortholog | 1-to-1 | RC29701G00220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29701G00220 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL09G014520 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G014520 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST09G005160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G005160 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP4G22410 | 1 | |
Tree-based ortholog | 1-to-many | TP3G07330 TP6G40810 | 2 | ||
Anchor point | N/A | TP3G07330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G07330 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0010G01930 | 1 | |
Tree-based ortholog | 1-to-1 | TC0005G01720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G01720 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV12G08800 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G03290 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-1 | ZM07G24160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G24160 | 1 |