Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_003G01930
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_003G01930 CRU_006G14480 | 2 |  |
| Anchor point | CRU_006G14480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_003G01930 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00002G02310 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00002G02310 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL3G02110 AL6G16530 | 2 | |
| Anchor point | 1-to-many | AL6G16530 AL3G02110 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G02110 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G16650 | 1 | |
| Anchor point | 1-to-1 | AT5G16650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G16650 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV3G09890 | 1 | |
| Anchor point | 1-to-1 | BV3G09890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G09890 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G35520 BR10G18730 | 2 | |
| Anchor point | 1-to-many | BR01G35520 BR10G18730 BR03G07020 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G35520 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00309G00040 | 1 | |
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G04420 | 1 | |
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G08640 | 1 | |
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00246G00030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00246G00030 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G04690 | 1 | |
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0011G00570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G00570 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-1 | FV7G33630 | 1 | |
| Anchor point | 1-to-1 | FV7G33630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G33630 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G37570 GM11G11710 GM12G01810 | 3 | |
| Anchor point | 1-to-1 | GM12G01810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G01810 GM11G11710 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR03G05690 GR04G25600 | 2 | |
| Anchor point | 1-to-many | GR06G11710 GR04G25600 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR04G25600 GR03G05690 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G050110 | 1 | |
| Anchor point | 1-to-1 | LJ3G050110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G050110 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G113000 | 1 | |
| Manihot esculenta | Orthologous gene family | many-to-1 | ME03614G01180 | 1 | |
| Anchor point | 1-to-1 | ME03614G01180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03614G01180 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G065860 | 1 | |
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G46640 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G46640 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL06G02150 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL06G02150 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00070G00190 PP00227G00430 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00227G00430 PP00070G00190 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT13G07820 PT19G04140 | 2 | |
| Anchor point | 1-to-1 | PT13G07820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT19G04140 PT13G07820 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_002G31450 | 1 | |
| Anchor point | 1-to-many | PPE_002G31450 PPE_008G28230 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G31450 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30073G01080 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30073G01080 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G097240 | 1 | |
| Anchor point | 1-to-1 | SL03G097240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G097240 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST03G017930 | 1 | |
| Anchor point | 1-to-1 | ST03G017930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G017930 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP3G01960 TP6G27500 | 2 | |
| Anchor point | 1-to-many | TP6G27500 TP3G01960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G01960 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G22170 | 1 | |
| Anchor point | 1-to-1 | TC0005G22170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G22170 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV16G05340 | 1 | |
| Anchor point | 1-to-1 | VV16G05340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G05340 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM05G37200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G37200 | 1 |