Integrative Orthology Viewer: CRU_003G01750 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_001G15260 CRU_002G25070 CRU_003G01750 | 3 | |
Tree-based ortholog | CRU_003G01750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_003G01750 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00163G00140 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00061G00160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00163G00140 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G17090 AL2G28720 AL3G01940 | 3 | |
Tree-based ortholog | 1-to-1 | AL3G01940 | 1 | ||
Anchor point | N/A | AL3G01940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G01940 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G16220 AT1G79630 | 2 | |
Tree-based ortholog | 1-to-1 | AT3G02750 | 1 | ||
Anchor point | N/A | AT3G02750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G02750 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G15050 | 1 | |
Tree-based ortholog | 1-to-1 | BV4G15050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G15050 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G25460 BR06G11410 BR07G34130 | 3 | |
Tree-based ortholog | 1-to-many | BR01G35430 BR03G29060 BR05G35460 | 3 | ||
Anchor point | N/A | BR03G29060 BR01G35430 BR05G35460 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G35460 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00039G00170 | 1 | |
Anchor point | N/A | CP00039G00170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00012G00510 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR03G12250 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G06590 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL10G04440 CL11G03240 | 2 | |
Tree-based ortholog | 1-to-1 | CL03G10310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G03240 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00013G02500 CS00130G00130 | 2 | |
Tree-based ortholog | 1-to-1 | CS00130G00130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00130G00130 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00009G00560 CM00021G03500 | 2 | |
Tree-based ortholog | 1-to-1 | CM00009G00560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00009G00560 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0006G16010 | 1 | |
Tree-based ortholog | 1-to-1 | EG0002G11670 | 1 | ||
Anchor point | N/A | EG0002G11670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G12060 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G28170 FV3G34220 | 2 | |
Tree-based ortholog | 1-to-1 | FV0G28170 | 1 | ||
Anchor point | N/A | FV0G28170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G28170 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM06G45100 GM12G12180 GM18G47810 | 3 | |
Tree-based ortholog | 1-to-many | GM18G47810 GM09G38510 | 2 | ||
Anchor point | N/A | GM18G47810 GM09G38510 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G47810 GM09G38510 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR05G12690 | 1 | |
Tree-based ortholog | 1-to-many | GR12G02670 GR04G26330 GR10G13860 | 3 | ||
Anchor point | N/A | GR04G26330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G02670 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ3G039120 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G068510 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G344650 MD00G399300 MD03G003450 | 3 | |
Tree-based ortholog | 1-to-many | MD12G025270 MD04G019910 | 2 | ||
Anchor point | N/A | MD04G019910 MD12G025270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD12G025270 MD04G019910 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME06711G00300 | 1 | |
Tree-based ortholog | 1-to-many | ME03219G00180 ME06711G00300 ME08679G00020 | 3 | ||
Anchor point | N/A | ME06711G00300 ME03219G00180 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06711G00300 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G080170 | 1 | |
Tree-based ortholog | 1-to-1 | MT7G080170 | 1 | ||
Anchor point | N/A | MT7G080170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G080170 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS08G39100 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G39100 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL13G02360 OL21G00640 OL11G00840 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G00840 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00007G00330 PP00069G01150 PP00069G01160 | 3 | |
Tree-based ortholog | 1-to-many | PP00069G01150 PP00007G00330 PP00069G01160 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00069G01160 PP00007G00330 PP00069G01150 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G47330 PT04G06620 PT19G05420 | 3 | |
Tree-based ortholog | 1-to-many | PT19G05420 PT13G08550 | 2 | ||
Anchor point | N/A | PT13G08550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT19G05420 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_006G03680 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_006G36440 | 1 | ||
Anchor point | N/A | PPE_006G36440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G36440 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29929G00740 | 1 | |
Tree-based ortholog | 1-to-1 | RC29929G00740 | 1 | ||
Anchor point | N/A | RC29929G00740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29929G00740 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL07G066260 SL10G005640 | 2 | |
Tree-based ortholog | 1-to-many | SL05G055790 SL04G056560 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G055790 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST07G027490 ST10G006010 | 2 | |
Tree-based ortholog | 1-to-many | ST05G028980 ST04G020140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G020140 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G14440 TP5G34700 | 2 | |
Tree-based ortholog | 1-to-1 | TP3G01780 | 1 | ||
Anchor point | N/A | TP3G01780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G01780 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0005G19370 | 1 | |
Tree-based ortholog | 1-to-1 | TC0005G19370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G19370 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV19G06920 | 1 | |
Tree-based ortholog | 1-to-1 | VV04G03150 | 1 | ||
Anchor point | N/A | VV04G03150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV04G03150 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM08G02470 ZM04G31970 ZM01G31570 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G31570 ZM04G31970 | 2 |