Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_003G00920
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_003G00920 | 1 |  |
| Tree-based ortholog | CRU_003G00920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_003G00920 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00010G04770 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G04400 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL3G00940 | 1 | |
| Tree-based ortholog | 1-to-1 | AL3G00940 | 1 | ||
| Anchor point | N/A | AL3G00940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G00940 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G01175 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G01175 | 1 | ||
| Anchor point | N/A | AT3G01175 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G01175 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV0G00190 BV5G05360 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G54240 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR01G34720 | 1 | |
| Tree-based ortholog | 1-to-1 | BR01G34720 | 1 | ||
| Anchor point | N/A | BR02G19920 BR01G34720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G34720 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00014G00890 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00014G00890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00014G00890 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL09G01370 CL06G15380 | 2 | |
| Anchor point | N/A | CL10G13120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G25270 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00015G01790 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00015G01790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00015G01790 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00067G00620 CM00030G02370 | 2 | |
| Anchor point | N/A | CM00011G08240 CM00051G00260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00003G07820 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0009G16320 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0009G16320 | 1 | ||
| Anchor point | N/A | EG0009G16290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G16320 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV0G18010 FV5G36050 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G44580 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM08G24050 GM07G00400 GM08G04600 ... | 6 | |
| Anchor point | N/A | GM09G37350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM01G05820 GM07G35770 GM20G04913 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR11G09730 | 1 | |
| Tree-based ortholog | 1-to-1 | GR11G09730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G09730 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ3G029470 LJ4G049610 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G049610 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD00G344090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD16G003860 MD00G335680 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME11341G00770 | 1 | |
| Tree-based ortholog | 1-to-1 | ME11341G00770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11341G00770 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT4G005350 MT8G104270 MT6G084440 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G010160 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS08G40820 OS01G03870 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G24700 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT17G08420 | 1 | |
| Tree-based ortholog | 1-to-1 | PT17G08420 | 1 | ||
| Anchor point | N/A | PT04G12680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT17G08420 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_003G01050 PPE_005G22400 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G28590 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC28838G00130 | 1 | |
| Tree-based ortholog | 1-to-1 | RC28838G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28838G00130 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL02G087990 | 1 | |
| Tree-based ortholog | 1-to-1 | SL02G087990 | 1 | ||
| Anchor point | N/A | SL02G067350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G087990 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST02G034870 | 1 | |
| Tree-based ortholog | 1-to-many | ST06G022550 ST03G033010 ST12G018300 | 3 | ||
| Anchor point | N/A | ST02G034870 ST02G013210 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G034870 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP3G00940 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G00940 | 1 | ||
| Anchor point | N/A | TP3G00930 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G00940 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0004G08720 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0004G08720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G08720 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV14G02310 | 1 | |
| Tree-based ortholog | 1-to-1 | VV14G02310 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G02310 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM04G09320 ZM03G06200 ZM08G02930 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM07G13930 ZM02G30680 ZM09G09970 | 3 |