Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_002G23010
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_002G23010 | 1 |  |
| Tree-based ortholog | CRU_002G23010 | 1 | ||
| Anchor point | CRU_001G20240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_002G23010 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00054G00620 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00054G00620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00054G00620 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL2G26430 | 1 | |
| Tree-based ortholog | 1-to-1 | AL2G26430 | 1 | ||
| Anchor point | 1-to-many | AL1G22920 AL2G26430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G26430 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G77470 | 1 | |
| Tree-based ortholog | 1-to-1 | AT1G77470 | 1 | ||
| Anchor point | 1-to-many | AT1G21690 AT1G77470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G77470 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV5G07830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G02140 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR02G24290 BR07G19240 | 2 | |
| Tree-based ortholog | 1-to-many | BR07G19240 BR02G24290 | 2 | ||
| Anchor point | 1-to-many | BR08G24580 BR02G24290 BR06G15840 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G19240 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00064G01090 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00064G01090 | 1 | ||
| Anchor point | 1-to-1 | CP00064G01090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00064G01090 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR12G09720 | 1 | |
| Tree-based ortholog | 1-to-1 | CR12G09720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G09720 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL08G05820 | 1 | |
| Tree-based ortholog | 1-to-1 | CL08G05820 | 1 | ||
| Anchor point | 1-to-1 | CL08G05820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G05820 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00004G00550 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00004G00550 | 1 | ||
| Anchor point | 1-to-1 | CS00004G00400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G00550 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM01598G00560 | 1 | |
| Tree-based ortholog | 1-to-1 | CM01598G00560 | 1 | ||
| Anchor point | 1-to-1 | CM01598G00560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM01598G00560 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0006G37150 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0006G37150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G37150 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV2G29880 | 1 | |
| Tree-based ortholog | 1-to-1 | FV2G29880 | 1 | ||
| Anchor point | 1-to-1 | FV2G29880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G29880 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM04G42790 GM06G11980 | 2 | |
| Tree-based ortholog | 1-to-many | GM06G11980 GM04G42790 | 2 | ||
| Anchor point | 1-to-many | GM04G42550 GM06G11980 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G11980 GM04G42790 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR09G24760 | 1 | |
| Tree-based ortholog | 1-to-1 | GR09G24760 | 1 | ||
| Anchor point | 1-to-1 | GR09G24760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G24760 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G011600 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G011590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G011600 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD08G016460 | 1 | |
| Tree-based ortholog | 1-to-many | MD15G026680 MD00G395920 MD08G016460 | 3 | ||
| Anchor point | 1-to-many | MD15G026680 MD08G016460 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD08G016460 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME04314G00060 | 1 | |
| Tree-based ortholog | 1-to-1 | ME04314G00060 | 1 | ||
| Anchor point | 1-to-many | ME04314G00060 ME07238G00510 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04314G00060 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT3G088120 | 1 | |
| Tree-based ortholog | 1-to-1 | MT3G088120 | 1 | ||
| Anchor point | 1-to-1 | MT3G088120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G088120 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS02G53500 | 1 | |
| Tree-based ortholog | 1-to-1 | OS02G53500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G53500 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-many | OL02G04450 OL02G04460 | 2 | |
| Tree-based ortholog | 1-to-many | OL02G04460 OL02G04450 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL02G04450 OL02G04460 | 2 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00133G00210 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00133G00210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00133G00210 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT02G08120 | 1 | |
| Tree-based ortholog | 1-to-1 | PT02G08120 | 1 | ||
| Anchor point | 1-to-1 | PT05G18000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT02G08120 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G49810 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G49810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G49810 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29648G01000 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29648G01000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29648G01000 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL06G060150 | 1 | |
| Tree-based ortholog | 1-to-1 | SL06G060150 | 1 | ||
| Anchor point | 1-to-many | SL06G060150 SL11G012820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G060150 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST06G017810 | 1 | |
| Tree-based ortholog | 1-to-1 | ST06G017810 | 1 | ||
| Anchor point | 1-to-1 | ST06G017810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G017810 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G32630 | 1 | |
| Tree-based ortholog | 1-to-1 | TP5G32630 | 1 | ||
| Anchor point | 1-to-many | TP1G19230 TP5G32630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G32630 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0008G12470 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0008G12470 | 1 | ||
| Anchor point | 1-to-1 | TC0008G12470 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G12470 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV18G01910 | 1 | |
| Tree-based ortholog | 1-to-1 | VV18G01910 | 1 | ||
| Anchor point | 1-to-1 | VV18G01780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G01910 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM05G42180 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM05G42180 | 1 | ||
| Anchor point | 1-to-1 | ZM10G03020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G42180 | 1 |