Integrative Orthology Viewer: CRU_002G11570 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_002G11570 CRU_003G03570 | 2 | |
Tree-based ortholog | CRU_002G11570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_002G11570 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00009G01210 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00032G00330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00032G00330 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL2G13320 | 1 | |
Tree-based ortholog | 1-to-1 | AL2G13320 | 1 | ||
Anchor point | N/A | AL2G13320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G13320 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G66340 AT3G04580 | 2 | |
Tree-based ortholog | 1-to-1 | AT1G66340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G66340 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G42220 BV7G12240 | 2 | |
Tree-based ortholog | 1-to-1 | BV7G12240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G12240 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G40810 BR07G24000 | 2 | |
Tree-based ortholog | 1-to-1 | BR07G24000 | 1 | ||
Anchor point | N/A | BR07G24000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G24000 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00084G00510 CP02388G00020 | 2 | |
Tree-based ortholog | 1-to-1 | CP00084G00510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00084G00510 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR13G02200 CR02G01610 | 2 | |
Citrullus lanatus | Orthologous gene family | many-to-many | CL09G05120 CL11G05300 | 2 | |
Tree-based ortholog | 1-to-1 | CL11G05300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G05300 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00206G00110 CS00222G00130 | 2 | |
Tree-based ortholog | 1-to-1 | CS00206G00110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00206G00110 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00003G00040 | 1 | |
Tree-based ortholog | 1-to-1 | CM00003G00040 | 1 | ||
Anchor point | N/A | CM00055G00910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00003G00040 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0008G34540 | 1 | |
Tree-based ortholog | 1-to-1 | EG0010G18060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G18060 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G26030 FV1G19490 | 2 | |
Tree-based ortholog | 1-to-1 | FV1G19490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G19490 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G41220 GM09G00490 GM10G31040 ... | 6 | |
Tree-based ortholog | 1-to-many | GM12G37050 GM09G00490 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G37050 GM09G00490 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G03830 GR07G28010 GR09G35820 | 3 | |
Tree-based ortholog | 1-to-many | GR02G03830 GR09G35820 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR09G35820 GR02G03830 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G073520 LJ3G005870 | 2 | |
Tree-based ortholog | 1-to-1 | LJ3G005870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G005870 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD04G018660 MD12G024120 MD15G008440 ... | 4 | |
Tree-based ortholog | 1-to-many | MD15G020440 MD00G392430 MD00G009920 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G008440 MD15G020440 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00271G00050 ME03614G03090 ME12004G00790 | 3 | |
Tree-based ortholog | 1-to-many | ME00271G00050 ME12004G00790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00271G00050 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G079790 MT4G031150 MT7G116330 | 3 | |
Tree-based ortholog | 1-to-1 | MT4G031150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G031150 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS04G08740 | 1 | |
Tree-based ortholog | 1-to-1 | OS03G49500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G49500 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL09G02040 | 1 | |
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00176G00570 PP00001G01460 PP00145G00850 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00176G00570 PP00054G01770 PP00015G00830 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G20420 PT03G03230 PT13G04410 ... | 4 | |
Tree-based ortholog | 1-to-many | PT03G03230 PT01G20420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G03230 PT01G20420 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G55910 PPE_006G35170 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_001G55910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G55910 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC28802G00070 | 1 | |
Tree-based ortholog | 1-to-1 | RC28802G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28802G00070 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL05G055070 SL07G056580 SL11G006180 | 3 | |
Tree-based ortholog | 1-to-many | SL12G011330 SL07G056580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G011330 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST05G028140 ST07G025670 ST11G005240 ... | 4 | |
Tree-based ortholog | 1-to-many | ST12G006350 ST07G025670 ST03G035240 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G006350 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G03420 TP5G21360 | 2 | |
Tree-based ortholog | 1-to-1 | TP5G21360 | 1 | ||
Anchor point | N/A | TP5G21360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G29460 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G27520 TC0007G13760 | 2 | |
Tree-based ortholog | 1-to-1 | TC0007G13760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G13760 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV19G11980 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G11980 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM01G49860 ZM05G05940 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G05940 ZM01G49860 | 2 |