Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_002G10900
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_002G10900 | 1 |  |
| Tree-based ortholog | CRU_002G10900 | 1 | ||
| Anchor point | CRU_001G04890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_002G10900 CRU_003G11310 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00001G02790 ATR_00001G02820 ATR_00001G02800 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00001G02790 ATR_00001G02820 | 2 | ||
| Arabidopsis lyrata | Tree-based ortholog | 1-to-1 | AL3G12920 | 1 | |
| Anchor point | 1-to-1 | AL1G05370 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G12920 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT3G12500 | 1 | |
| Anchor point | 1-to-1 | AT1G05850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G12500 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV1G09720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV1G09720 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR03G32980 BR03G32990 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR05G30310 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00057G00220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00057G00220 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL10G01790 CL01G20990 CL01G20960 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G20970 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00017G02020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00017G02020 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-many | CM00021G00430 CM00007G09980 CM00007G09970 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00007G09970 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0009G12280 EG0086G00060 EG0010G21830 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0009G12280 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV2G11480 FV1G12440 FV1G12430 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV2G11480 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM01G36480 GM16G22680 GM02G04820 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM02G04820 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR02G20350 GR02G20360 GR10G05890 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR02G20350 GR02G20360 | 2 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ2G019650 LJ1G042010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G042010 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD02G010540 MD00G423370 MD02G010570 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G343330 MD02G010540 MD00G423370 | 3 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME07579G00040 ME00741G00020 ME00741G00030 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME03303G00030 ME07579G00050 ME00741G00030 ... | 4 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT3G118390 MT8G074330 MT8G074335 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT3G118390 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS03G04060 OS10G39680 OS10G39700 ... | 11 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS06G51060 OS03G30470 OS06G51050 | 3 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00133G00180 PP00306G00090 PP00305G00070 ... | 12 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00305G00070 PP00133G00180 PP00306G00090 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT00G07050 PT09G14220 PT09G14170 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT04G18200 PT09G14170 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-many | PPE_008G19160 PPE_007G19920 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_008G19160 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC29797G00100 RC29797G00080 RC29830G00350 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29797G00100 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL02G082960 SL02G061770 SL10G074360 ... | 11 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL10G074440 SL10G055810 SL10G055820 ... | 4 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST02G026320 ST02G009500 ST10G018960 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST02G009500 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP3G10630 | 1 | |
| Anchor point | 1-to-1 | TP1G04670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP3G10630 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0002G04660 TC0001G00770 TC0001G00780 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0002G04660 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV00G26750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV00G26750 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM05G16160 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G09870 | 1 |