Integrative Orthology Viewer: CRU_002G06260 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_002G06260 CRU_003G02750 CRU_007G30760 | 3 | |
Tree-based ortholog | CRU_002G06260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_002G06260 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00004G00830 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00004G00830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00004G00830 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL2G07260 AL3G03170 AL7G33710 | 3 | |
Tree-based ortholog | 1-to-1 | AL2G07260 | 1 | ||
Anchor point | N/A | AL2G07260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G07260 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G58030 AT3G03720 AT5G36940 | 3 | |
Tree-based ortholog | 1-to-1 | AT1G58030 | 1 | ||
Anchor point | N/A | AT1G58030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G58030 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G17410 BV0G70530 BV5G21350 | 3 | |
Tree-based ortholog | 1-to-many | BV0G70530 BV5G21350 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV5G21350 BV0G70530 | 2 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G12480 BR02G39950 BR07G00660 ... | 5 | |
Tree-based ortholog | 1-to-1 | BR09G12160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G12000 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00161G00280 CP00161G00300 | 2 | |
Tree-based ortholog | 1-to-1 | CP00161G00300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00161G00300 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR01G08910 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G08910 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL04G04770 CL04G04810 | 2 | |
Tree-based ortholog | 1-to-1 | CL04G04810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G04810 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00029G01300 | 1 | |
Tree-based ortholog | 1-to-1 | CS00029G01300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00029G01300 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00010G00710 CM00010G00740 | 2 | |
Tree-based ortholog | 1-to-1 | CM00010G00740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00010G00740 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G17790 EG0001G17810 EG0011G12710 ... | 4 | |
Tree-based ortholog | 1-to-many | EG0001G17810 EG0001G17790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0001G17790 EG0001G17810 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV1G22750 | 1 | |
Tree-based ortholog | 1-to-1 | FV1G22750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G22750 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G11410 GM16G04050 GM19G29440 ... | 4 | |
Tree-based ortholog | 1-to-many | GM19G29450 GM05G11410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM19G29450 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR07G25570 GR07G25580 GR13G19580 | 3 | |
Tree-based ortholog | 1-to-many | GR07G25570 GR13G19580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G25570 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G021170 LJ1G055100 LJ1G055110 | 3 | |
Tree-based ortholog | 1-to-many | LJ1G055110 LJ1G021170 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G055110 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G035390 MD00G443430 | 2 | |
Tree-based ortholog | 1-to-many | MD00G035390 MD12G001050 MD00G443430 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G443430 MD12G001050 MD00G035390 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02431G00190 ME03614G01930 ME03614G01940 | 3 | |
Tree-based ortholog | 1-to-many | ME02431G00190 ME03614G01930 ME03614G01920 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02431G00190 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT6G027630 MT6G027650 MT6G027660 ... | 7 | |
Tree-based ortholog | 1-to-many | MT7G086610 MT6G027650 MT6G027630 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G086610 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G45170 OS10G30090 OS12G42850 | 3 | |
Tree-based ortholog | 1-to-many | OS12G42850 OS03G45170 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G42850 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL14G00150 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL14G00150 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00119G00240 PP00230G00060 | 2 | |
Tree-based ortholog | 1-to-many | PP00119G00240 PP00230G00060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00230G00060 PP00119G00240 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT13G06500 PT19G03960 PT19G03970 | 3 | |
Tree-based ortholog | 1-to-many | PT13G06500 PT19G03970 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT19G03970 PT13G06500 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_007G02040 PPE_007G02050 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_007G02040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G02040 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC30072G00200 RC30072G00210 | 2 | |
Tree-based ortholog | 1-to-1 | RC30072G00200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30072G00200 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G037510 SL10G081460 | 2 | |
Tree-based ortholog | 1-to-1 | SL10G081460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G081460 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G008140 ST10G026660 | 2 | |
Tree-based ortholog | 1-to-1 | ST10G026660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G026660 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G00120 TP3G02690 TP7G05580 | 3 | |
Tree-based ortholog | 1-to-1 | TP2G00120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G00120 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G24290 TC0005G24310 | 2 | |
Tree-based ortholog | 1-to-1 | TC0005G24290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G24290 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV08G05640 | 1 | |
Tree-based ortholog | 1-to-1 | VV08G05650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G05650 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G29850 ZM01G48560 ZM05G07280 ... | 4 | |
Tree-based ortholog | 1-to-many | ZM01G29850 ZM05G07280 ZM01G48560 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G29850 | 1 |