Integrative Orthology Viewer: CRU_001G32360 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_001G32360 CRU_006G12660 | 2 | |
Tree-based ortholog | CRU_030G00010 CRU_018G00030 CRU_001G32360 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_001G32360 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00058G01610 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00058G01610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00058G01610 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL6G14590 | 1 | |
Tree-based ortholog | many-to-1 | AL6G14590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G14590 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G14780 | 1 | |
Tree-based ortholog | many-to-1 | AT5G14780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G14780 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G41630 | 1 | |
Tree-based ortholog | many-to-1 | BV0G41630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G41630 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR10G20030 | 1 | |
Tree-based ortholog | many-to-many | BR10G20030 BR02G07140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G20030 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00039G00830 | 1 | |
Tree-based ortholog | many-to-1 | CP00039G00830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00039G00830 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR07G07710 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-1 | CL10G12350 | 1 | |
Tree-based ortholog | many-to-1 | CL10G12350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G12350 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00028G00300 | 1 | |
Tree-based ortholog | many-to-1 | CS00028G00300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00028G00300 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00011G09050 | 1 | |
Tree-based ortholog | many-to-1 | CM00011G09050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G09050 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0010G19140 EG0010G19150 EG0010G19160 | 3 | |
Tree-based ortholog | many-to-many | EG0010G19150 EG0010G19160 EG0010G19140 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0010G19140 EG0010G19160 EG0010G19150 | 3 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV0G38680 | 1 | |
Tree-based ortholog | many-to-1 | FV0G38680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G38680 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM13G23790 GM19G01200 GM19G01210 | 3 | |
Tree-based ortholog | many-to-many | GM19G01210 GM13G23790 GM19G01200 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G23790 GM19G01210 GM19G01200 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR01G26140 | 1 | |
Tree-based ortholog | many-to-1 | GR01G26140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G26140 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G015500 | 1 | |
Tree-based ortholog | many-to-1 | LJ2G015500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G015500 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G082290 MD17G002640 | 2 | |
Tree-based ortholog | many-to-many | MD00G082290 MD17G002640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD17G002640 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04613G00010 ME09372G00130 | 2 | |
Tree-based ortholog | many-to-many | ME04613G00010 ME09372G00130 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME09372G00130 ME04613G00010 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT6G007170 MT6G007175 | 2 | |
Tree-based ortholog | many-to-many | MT6G007170 MT6G007175 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G007170 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS06G29180 OS06G29220 | 2 | |
Tree-based ortholog | many-to-many | OS06G29220 OS06G29180 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G29180 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G01490 | 1 | |
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00106G00060 | 1 | |
Tree-based ortholog | many-to-1 | PP00106G00060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00106G00060 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT14G16130 | 1 | |
Tree-based ortholog | many-to-1 | PT14G16130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT14G16130 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_003G26150 | 1 | |
Tree-based ortholog | many-to-1 | PPE_003G26150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G26150 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29822G00150 | 1 | |
Tree-based ortholog | many-to-1 | RC29822G00150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29822G00150 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL02G086880 | 1 | |
Tree-based ortholog | many-to-1 | SL02G086880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G086880 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST02G036030 | 1 | |
Tree-based ortholog | many-to-many | ST02G036030 ST12G016830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G036030 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G30980 TP6G29260 | 2 | |
Tree-based ortholog | many-to-many | TP6G29260 TP3G30980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G29260 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G00870 | 1 | |
Tree-based ortholog | many-to-1 | TC0004G00870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G00870 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV14G11690 | 1 | |
Tree-based ortholog | many-to-1 | VV14G11690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G11690 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM02G39040 ZM04G40320 ZM05G38150 ... | 5 | |
Tree-based ortholog | many-to-many | ZM04G40320 ZM08G23880 ZM02G39040 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G09440 | 1 |