Integrative Orthology Viewer: CRU_001G28770 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_001G28760 CRU_001G28770 CRU_006G04420 | 3 | |
Tree-based ortholog | CRU_001G28770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_001G28770 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00144G00170 | 1 | |
Tree-based ortholog | 1-to-many | ATR_00048G01610 ATR_00048G01620 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00048G01610 ATR_00048G01620 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G33030 AL1G33040 AL6G05230 | 3 | |
Tree-based ortholog | 1-to-1 | AL1G33040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G33040 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G31820 AT1G31830 AT3G19553 ... | 4 | |
Tree-based ortholog | 1-to-1 | AT1G31830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G31830 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV5G19070 | 1 | |
Tree-based ortholog | 1-to-1 | BV5G19070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G19070 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G30450 BR05G24080 BR09G27100 ... | 4 | |
Tree-based ortholog | 1-to-1 | BR09G27090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G27090 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00106G00700 | 1 | |
Tree-based ortholog | 1-to-1 | CP00137G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00137G00070 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G11600 | 1 | |
Tree-based ortholog | 1-to-1 | CR06G11600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G11600 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G06810 | 1 | |
Tree-based ortholog | 1-to-1 | CL07G00800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G00800 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00023G00950 | 1 | |
Tree-based ortholog | 1-to-1 | CS00023G00950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00023G00950 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00034G01160 | 1 | |
Tree-based ortholog | 1-to-1 | CM00054G01090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00054G01090 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G21550 EG0007G09340 EG0009G11910 | 3 | |
Tree-based ortholog | 1-to-1 | EG0004G21550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G21550 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G28430 FV2G27150 FV3G12920 ... | 4 | |
Tree-based ortholog | 1-to-many | FV0G28430 FV4G22590 FV3G12920 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV0G28430 FV3G12920 FV4G22590 | 3 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G35320 GM01G45410 GM09G34750 ... | 5 | |
Tree-based ortholog | 1-to-many | GM09G34750 GM01G35320 GM16G17460 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM01G35320 GM09G34750 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR11G11720 GR12G15670 | 2 | |
Tree-based ortholog | 1-to-1 | GR11G11720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G11720 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G000520 LJ2G027190 | 2 | |
Tree-based ortholog | 1-to-1 | LJ2G027190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G027190 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G065030 MD00G112510 MD00G283860 ... | 5 | |
Tree-based ortholog | 1-to-many | MD06G001720 MD00G112510 MD06G001700 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G283860 MD00G065030 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01493G00130 ME03329G00140 ME06988G00050 ... | 4 | |
Tree-based ortholog | 1-to-1 | ME01493G00130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01493G00130 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G112950 MT5G005160 MT5G026780 | 3 | |
Tree-based ortholog | 1-to-many | MT5G026780 MT00G37960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G026780 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G47210 OS03G37984 OS12G39080 | 3 | |
Tree-based ortholog | 1-to-1 | OS03G37984 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G37984 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00240G00290 PP00297G00090 PP00312G00100 | 3 | |
Tree-based ortholog | 1-to-many | PP00297G00090 PP00240G00290 PP00312G00100 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00297G00090 PP00312G00100 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G29610 PT03G10360 PT04G17800 ... | 4 | |
Tree-based ortholog | 1-to-1 | PT03G10360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT03G10360 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_005G02130 PPE_008G18640 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_005G02130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G02130 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC28152G00290 | 1 | |
Tree-based ortholog | 1-to-1 | RC29827G00660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29827G00660 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G111800 SL08G005540 SL08G075710 ... | 4 | |
Tree-based ortholog | 1-to-many | SL08G078100 SL08G075710 SL08G005540 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G005540 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G049190 ST08G008390 ST08G020720 ... | 5 | |
Tree-based ortholog | 1-to-many | ST08G023670 ST08G020720 ST08G008390 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G008390 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G17610 TP6G37240 | 2 | |
Tree-based ortholog | 1-to-1 | TP1G27540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G27540 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G13980 TC0002G05260 | 2 | |
Tree-based ortholog | 1-to-1 | TC0001G13980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G13980 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV03G04270 VV03G10060 | 2 | |
Tree-based ortholog | 1-to-many | VV02G08970 VV02G08960 VV02G08950 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G04270 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G27660 ZM10G09870 | 2 | |
Tree-based ortholog | 1-to-1 | ZM10G09870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G09870 | 1 |