Integrative Orthology Viewer: CRU_001G26960 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_001G26950 CRU_001G26960 CRU_001G26970 ... | 5 | |
Tree-based ortholog | CRU_001G26950 CRU_001G26960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_001G26950 CRU_001G26960 CRU_001G26970 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00189G00050 | 1 | |
Tree-based ortholog | many-to-many | ATR_00076G00180 ATR_00169G00350 ATR_00006G01520 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00189G00050 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G30860 AL1G30870 AL4G19660 | 3 | |
Tree-based ortholog | many-to-many | AL1G30860 AL1G30870 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL1G30860 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G29910 AT1G29920 AT1G29930 ... | 5 | |
Tree-based ortholog | many-to-1 | AT2G34420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT1G29930 AT1G29920 AT1G29910 | 3 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G51160 BV0G51170 BV0G51180 ... | 4 | |
Tree-based ortholog | many-to-many | BV0G06340 BV0G51160 BV7G07610 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BV0G51160 BV0G51180 BV0G51170 ... | 4 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G17080 BR05G10110 BR07G06010 ... | 5 | |
Tree-based ortholog | many-to-many | BR08G21050 BR07G06010 BR07G06020 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR07G06010 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00017G00870 | 1 | |
Tree-based ortholog | many-to-many | CP00067G00680 CP00067G00690 CP00211G00070 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00017G00870 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-many | CR16G10680 CR08G02460 CR08G02800 ... | 25 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR01G12390 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G24440 CL01G24450 CL02G18600 | 3 | |
Tree-based ortholog | many-to-many | CL02G18600 CL01G24440 CL01G24450 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL02G18600 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00007G02120 | 1 | |
Tree-based ortholog | many-to-many | CS00057G00620 CS00077G00240 CS07837G00010 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00007G02120 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00001G08540 CM00007G01720 CM00007G01730 ... | 4 | |
Tree-based ortholog | many-to-many | CM00039G01010 CM00007G01730 CM00007G01720 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CM00007G01720 CM00007G01730 | 2 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G02430 EG0004G02440 EG0004G02450 ... | 4 | |
Tree-based ortholog | many-to-many | EG0001G08370 EG0005G18560 EG0004G02430 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | EG0004G02430 EG0004G02460 EG0004G02450 ... | 4 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV3G21500 FV6G34990 | 2 | |
Tree-based ortholog | many-to-many | FV3G21500 FV6G15070 FV6G34990 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G34990 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM16G27995 GM16G28030 GM16G28070 | 3 | |
Tree-based ortholog | many-to-many | GM05G25810 GM08G08770 GM16G28070 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM16G27995 GM16G28030 GM16G28070 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR09G15690 GR10G16510 GR11G04160 | 3 | |
Tree-based ortholog | many-to-many | GR01G19200 GR01G22090 GR01G19230 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR10G16510 GR09G15690 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ4G004440 | 1 | |
Tree-based ortholog | many-to-many | LJ4G004440 LJ2G049530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G004440 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G003660 MD00G003670 MD00G003680 ... | 10 | |
Tree-based ortholog | many-to-many | MD00G003680 MD05G006630 MD00G003670 ... | 15 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G003680 MD00G299960 MD00G299970 ... | 10 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME09120G00020 | 1 | |
Tree-based ortholog | many-to-many | ME07991G00320 ME09120G00030 ME06582G00180 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME09120G00020 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT4G094605 MT6G011890 MT6G012080 ... | 4 | |
Tree-based ortholog | many-to-many | MT6G011880 MT6G011870 MT6G011890 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT4G094605 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G41710 OS09G17740 | 2 | |
Tree-based ortholog | many-to-many | OS01G41710 OS09G17740 OS03G39610 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G41710 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | many-to-many | OL20G01170 OL05G01790 OL17G01290 ... | 14 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL11G00990 | 1 | ||
Physcomitrella patens | Tree-based ortholog | many-to-many | PP00051G01560 PP00001G02860 PP00051G01570 ... | 18 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00001G00050 PP00177G00060 PP00463G00060 ... | 18 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT05G23920 PT05G23930 PT11G07950 | 3 | |
Tree-based ortholog | many-to-many | PT05G23920 PT05G23930 PT11G07950 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT05G23930 PT05G23920 PT11G07950 | 3 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_003G15650 PPE_003G15670 PPE_004G07260 ... | 4 | |
Tree-based ortholog | many-to-many | PPE_004G07270 PPE_004G07260 PPE_003G15670 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PPE_004G07270 PPE_004G07260 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29693G00880 RC30005G00650 | 2 | |
Tree-based ortholog | many-to-many | RC29597G00030 RC30076G01410 RC30005G00650 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | RC29693G00880 RC30005G00650 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G070940 SL02G070950 SL02G070970 ... | 10 | |
Tree-based ortholog | many-to-many | SL07G047850 SL12G006140 SL03G005770 ... | 12 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL03G005760 SL03G005770 SL03G005780 | 3 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G017160 ST02G017170 ST02G017340 ... | 12 | |
Tree-based ortholog | many-to-many | ST07G017980 ST12G011480 ST08G016800 ... | 20 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ST02G017340 ST02G017350 ST02G017160 | 3 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G34370 | 1 | |
Tree-based ortholog | many-to-1 | TP5G34370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G34370 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0006G15210 TC0006G15230 | 2 | |
Tree-based ortholog | many-to-many | TC0001G32060 TC0001G18610 TC0006G15230 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | TC0006G15210 TC0006G15230 | 2 | ||
Vitis vinifera | Tree-based ortholog | many-to-many | VV12G09430 VV12G04080 VV10G03650 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV19G03690 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G39190 ZM03G39220 ZM03G39230 ... | 5 | |
Tree-based ortholog | many-to-many | ZM08G10720 ZM07G21400 ZM01G45740 ... | 12 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G21400 | 1 |