Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
CRU_001G25230
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_001G25230 | 1 |  |
| Tree-based ortholog | CRU_001G25230 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_001G25230 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00040G01650 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00040G01650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00040G01650 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G29010 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G29010 | 1 | ||
| Anchor point | N/A | AL1G29010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G29010 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT1G19750 AT1G27840 | 2 | |
| Tree-based ortholog | 1-to-many | AT1G19750 AT1G27840 | 2 | ||
| Anchor point | N/A | AT1G27840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G27840 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV1G14050 | 1 | |
| Tree-based ortholog | 1-to-1 | BV1G14050 | 1 | ||
| Anchor point | N/A | BV1G14050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G14050 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR09G18360 | 1 | |
| Tree-based ortholog | 1-to-1 | BR09G18360 | 1 | ||
| Anchor point | N/A | BR09G18360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G18360 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00142G00250 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00142G00250 | 1 | ||
| Anchor point | N/A | CP00142G00250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00142G00250 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-many | CR01G07000 CR01G07010 | 2 | |
| Tree-based ortholog | 1-to-1 | CR01G07010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G07000 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL08G16110 | 1 | |
| Tree-based ortholog | 1-to-1 | CL08G16110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G16110 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00002G03040 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00002G03040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G03040 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00014G01570 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00014G01570 | 1 | ||
| Anchor point | N/A | CM00014G01570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G01570 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0006G00660 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0006G00660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G00660 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV2G31540 | 1 | |
| Tree-based ortholog | 1-to-1 | FV2G31540 | 1 | ||
| Anchor point | N/A | FV2G31540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G31540 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM04G04840 GM06G04930 | 2 | |
| Tree-based ortholog | 1-to-many | GM06G04930 GM04G04840 | 2 | ||
| Anchor point | N/A | GM04G04840 GM06G04930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G04840 GM06G04930 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR09G21990 | 1 | |
| Tree-based ortholog | 1-to-1 | GR09G21990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G21990 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G023630 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G023630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G023630 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD08G009870 MD15G001890 MD15G001900 | 3 | |
| Tree-based ortholog | 1-to-many | MD04G017480 MD00G358080 MD03G014330 ... | 9 | ||
| Anchor point | N/A | MD08G009870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD15G001900 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME09870G00350 | 1 | |
| Tree-based ortholog | 1-to-1 | ME09870G00350 | 1 | ||
| Anchor point | N/A | ME09870G00350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09870G00350 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT3G103170 | 1 | |
| Tree-based ortholog | 1-to-1 | MT3G103170 | 1 | ||
| Anchor point | N/A | MT3G103170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G103170 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS02G20430 | 1 | |
| Tree-based ortholog | 1-to-1 | OS02G20430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G20430 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL11G01410 | 1 | |
| Tree-based ortholog | 1-to-1 | OL11G01410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL11G01410 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00012G01800 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00012G01800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00012G01800 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-1 | PT14G01610 | 1 | |
| Tree-based ortholog | 1-to-1 | PT14G01610 | 1 | ||
| Anchor point | N/A | PT14G01610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT14G01610 | 1 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G42740 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G42740 | 1 | ||
| Anchor point | N/A | PPE_001G42740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G42740 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30170G01030 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30170G01030 | 1 | ||
| Anchor point | N/A | RC30170G01030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G01030 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL12G088340 | 1 | |
| Tree-based ortholog | 1-to-1 | SL12G088340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL12G088340 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST12G026440 | 1 | |
| Tree-based ortholog | 1-to-1 | ST12G026440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST12G026440 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G24040 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G24040 | 1 | ||
| Anchor point | N/A | TP1G24040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G24040 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0008G08510 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0008G08510 | 1 | ||
| Anchor point | N/A | TC0008G08510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G08510 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV18G05950 | 1 | |
| Tree-based ortholog | 1-to-1 | VV18G05950 | 1 | ||
| Anchor point | N/A | VV18G05950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G05950 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM03G26330 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM03G26330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G26330 | 1 |