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Integrative Orthology Viewer:
CRU_001G23720
(Capsella rubella)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Capsella rubella | Orthologous gene family | CRU_001G12750 CRU_001G23720 | 2 |  |
| Tree-based ortholog | CRU_001G23720 | 1 | ||
| Anchor point | CRU_005G02800 CRU_001G12750 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | CRU_001G23720 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00006G01510 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00006G01510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00006G01510 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL1G27360 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G27360 | 1 | ||
| Anchor point | many-to-many | AL1G14360 AL1G27360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G27360 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT1G26270 | 1 | |
| Tree-based ortholog | 1-to-1 | AT1G26270 | 1 | ||
| Anchor point | many-to-many | AT1G13640 AT1G26270 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G26270 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV2G08560 | 1 | |
| Tree-based ortholog | 1-to-1 | BV6G06430 | 1 | ||
| Anchor point | many-to-1 | BV2G08560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G06430 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR08G23170 BR09G29730 | 2 | |
| Tree-based ortholog | 1-to-many | BR09G29730 BR08G23170 | 2 | ||
| Anchor point | many-to-many | BR08G23170 BR09G29730 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR09G29730 BR08G23170 | 2 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00001G01690 CP00003G02270 CP00014G02450 | 3 | |
| Tree-based ortholog | 1-to-1 | CP00289G00070 | 1 | ||
| Anchor point | many-to-1 | CP00001G01690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00014G02450 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR02G07210 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G07210 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G24540 | 1 | |
| Tree-based ortholog | 1-to-many | CL05G24540 CL08G10340 | 2 | ||
| Anchor point | many-to-many | CL08G10340 CL05G24540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G10340 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00015G00490 CS00030G00560 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00019G01520 | 1 | ||
| Anchor point | many-to-1 | CS00019G01520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00019G01520 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-1 | CM00016G05040 | 1 | |
| Tree-based ortholog | 1-to-many | CM00016G05040 CM00014G07680 | 2 | ||
| Anchor point | many-to-many | CM00014G07680 CM00016G05040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G07680 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0007G02380 EG0007G18520 EG0010G12450 | 3 | |
| Tree-based ortholog | 1-to-many | EG0007G02380 EG0007G18520 | 2 | ||
| Anchor point | many-to-1 | EG0007G18520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0007G02380 EG0007G18520 | 2 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV5G11530 FV6G41830 | 2 | |
| Tree-based ortholog | 1-to-1 | FV0G03340 | 1 | ||
| Anchor point | many-to-1 | FV5G11530 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G03340 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G13700 GM08G28030 GM18G51100 | 3 | |
| Tree-based ortholog | 1-to-many | GM02G13700 GM01G09120 | 2 | ||
| Anchor point | many-to-1 | GM02G13700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM01G09120 GM02G13700 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR01G06650 | 1 | |
| Tree-based ortholog | 1-to-many | GR13G09810 GR08G17500 | 2 | ||
| Anchor point | many-to-many | GR13G09810 GR08G17500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G17500 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G020350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G020350 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G428630 MD00G446050 MD09G005340 ... | 4 | |
| Tree-based ortholog | 1-to-many | MD00G440100 MD16G002500 | 2 | ||
| Anchor point | many-to-1 | MD16G002500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G440100 MD16G002500 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME04043G01610 ME06871G01230 | 2 | |
| Tree-based ortholog | 1-to-many | ME08359G01120 ME06656G00620 | 2 | ||
| Anchor point | many-to-many | ME06656G00620 ME08359G01120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME08359G01120 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT7G017360 MT8G066090 | 2 | |
| Tree-based ortholog | 1-to-1 | MT8G066090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT8G066090 MT00G40210 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS04G57300 OS06G17290 OS08G38200 ... | 4 | |
| Tree-based ortholog | 1-to-1 | OS04G57300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G17290 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL07G02040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G02040 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00025G01020 PP00141G00330 | 2 | |
| Tree-based ortholog | 1-to-many | PP00025G01020 PP00141G00330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00141G00330 PP00025G01020 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-1 | PT17G10150 | 1 | |
| Tree-based ortholog | 1-to-many | PT10G13740 PT08G11220 | 2 | ||
| Anchor point | many-to-1 | PT08G11220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G13740 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_003G22700 PPE_005G21410 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_001G30620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G30620 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29790G00420 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30138G00690 | 1 | ||
| Anchor point | many-to-1 | RC30138G00690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30138G00690 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL04G005270 | 1 | |
| Tree-based ortholog | 1-to-many | SL05G010810 SL04G005270 | 2 | ||
| Anchor point | many-to-1 | SL04G005270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G010810 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST05G006400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G006400 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G12270 TP1G22400 | 2 | |
| Tree-based ortholog | 1-to-1 | TP1G22400 | 1 | ||
| Anchor point | many-to-many | TP1G22400 TP2G14690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G22400 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G11270 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0002G32090 | 1 | ||
| Anchor point | many-to-many | TC0004G11270 TC0002G32090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G32090 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV01G02220 VV17G05060 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV17G05060 VV01G02220 | 2 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G32270 ZM09G07820 ZM10G25990 | 3 | |
| Tree-based ortholog | 1-to-1 | ZM10G25990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G25990 | 1 |