Integrative Orthology Viewer: CRU_001G08570 (Capsella rubella)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Capsella rubella | Orthologous gene family | CRU_001G08570 CRU_002G06520 | 2 | |
Tree-based ortholog | CRU_001G08570 CRU_002G06520 | 2 | ||
Anchor point | CRU_002G06520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | CRU_001G08570 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00019G04370 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00019G04370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00019G04370 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G09340 AL1G53620 | 2 | |
Tree-based ortholog | many-to-many | AL1G53620 AL1G09340 | 2 | ||
Anchor point | 1-to-many | AL1G09340 AL1G53620 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G09340 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G09640 AT1G57720 | 2 | |
Tree-based ortholog | many-to-many | AT1G09640 AT1G57720 | 2 | ||
Anchor point | 1-to-many | AT1G09640 AT1G57720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G09640 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G46250 BV1G00930 | 2 | |
Tree-based ortholog | many-to-1 | BV0G46250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G00930 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR06G06100 BR08G29170 BR09G51100 | 3 | |
Tree-based ortholog | many-to-many | BR06G06100 BR08G29170 BR09G51100 | 3 | ||
Anchor point | 1-to-many | BR06G06100 BR09G51100 BR08G29170 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G29170 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00113G00250 | 1 | |
Tree-based ortholog | many-to-many | CP35333G00010 CP00113G00240 | 2 | ||
Anchor point | 1-to-1 | CP00113G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00113G00250 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR15G00610 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-many | CL07G06080 CL11G18340 | 2 | |
Tree-based ortholog | many-to-many | CL07G06080 CL11G18340 | 2 | ||
Anchor point | 1-to-1 | CL07G06080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G18340 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00564G00030 | 1 | |
Tree-based ortholog | many-to-many | CS00880G00030 CS00564G00030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00564G00030 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00028G00790 CM00041G01600 | 2 | |
Tree-based ortholog | many-to-many | CM00028G00790 CM00041G01600 | 2 | ||
Anchor point | 1-to-1 | CM00028G00790 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00041G01600 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0009G23530 | 1 | |
Tree-based ortholog | many-to-1 | EG0009G23530 | 1 | ||
Anchor point | 1-to-1 | EG0009G23530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G23530 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV3G28340 FV5G26000 FV7G39560 | 3 | |
Tree-based ortholog | many-to-many | FV7G39560 FV3G28340 FV5G26000 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G28340 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G40330 GM12G28670 GM16G00360 ... | 4 | |
Tree-based ortholog | many-to-many | GM07G40330 GM12G28670 GM16G00360 ... | 4 | ||
Anchor point | 1-to-many | GM16G00360 GM12G28670 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM17G00470 GM07G40330 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR08G04620 GR08G04630 | 2 | |
Tree-based ortholog | many-to-many | GR08G04630 GR08G04620 | 2 | ||
Anchor point | 1-to-1 | GR08G04620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR08G04620 GR08G04630 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ2G040530 LJ4G050440 | 2 | |
Tree-based ortholog | many-to-many | LJ2G040530 LJ4G050440 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | LJ2G040530 LJ4G050440 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G076260 MD15G033420 | 2 | |
Tree-based ortholog | many-to-many | MD00G079500 MD15G035980 MD15G035990 ... | 5 | ||
Anchor point | 1-to-1 | MD08G022600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD15G035990 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02538G00430 ME06914G01670 | 2 | |
Tree-based ortholog | many-to-many | ME02538G00430 ME06914G01670 | 2 | ||
Anchor point | 1-to-many | ME06914G01670 ME02538G00430 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06914G01670 ME02538G00430 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G005570 MT3G058940 MT4G134770 | 3 | |
Tree-based ortholog | many-to-1 | MT3G058940 | 1 | ||
Anchor point | 1-to-1 | MT2G005570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT3G058940 MT2G005570 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G12800 OS06G37440 | 2 | |
Tree-based ortholog | many-to-many | OS06G37440 OS02G12800 OS02G12794 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G37440 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL04G04610 | 1 | |
Tree-based ortholog | many-to-1 | OL04G04610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G04610 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00033G01050 PP00132G00610 PP00172G00150 | 3 | |
Tree-based ortholog | many-to-many | PP00172G00150 PP00132G00610 PP00033G01050 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00172G00150 PP00033G01050 PP00132G00610 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT03G00470 PT04G22630 PT19G07700 | 3 | |
Tree-based ortholog | many-to-many | PT03G00470 PT04G22630 PT19G07700 ... | 4 | ||
Anchor point | 1-to-many | PT04G22630 PT03G00470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G00470 PT04G22630 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G53480 PPE_001G56620 | 2 | |
Tree-based ortholog | many-to-1 | PPE_001G53480 | 1 | ||
Anchor point | 1-to-1 | PPE_001G53480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G56620 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29765G00070 | 1 | |
Tree-based ortholog | many-to-1 | RC28991G00010 | 1 | ||
Anchor point | 1-to-1 | RC29765G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29765G00070 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G011280 SL11G028100 | 2 | |
Tree-based ortholog | many-to-many | SL11G028100 SL06G011280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G011280 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST06G011990 ST11G018060 | 2 | |
Tree-based ortholog | many-to-many | ST06G011990 ST11G018060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G011990 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G08250 TP2G05690 | 2 | |
Tree-based ortholog | many-to-many | TP1G08250 TP2G05690 | 2 | ||
Anchor point | 1-to-many | TP2G05690 TP1G08250 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G08250 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G01470 | 1 | |
Tree-based ortholog | many-to-many | TC0002G01510 TC0002G01470 | 2 | ||
Anchor point | 1-to-1 | TC0002G01470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G01470 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV12G06950 VV18G13730 | 2 | |
Tree-based ortholog | many-to-many | VV12G06970 VV12G06960 VV18G13730 | 3 | ||
Anchor point | 1-to-1 | VV12G06970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G06960 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM04G37400 ZM04G37410 ZM05G27350 ... | 5 | |
Tree-based ortholog | many-to-many | ZM09G12600 ZM06G14530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G14530 ZM04G37400 ZM04G37410 | 3 |